| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1949 |
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| Symbol | |
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| ID | 3967055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2450726 |
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| End bp | 2452138 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921037 |
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| Product | putative 2-component sensor protein |
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| Protein accession | YP_527421 |
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| Protein GI | 90021594 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.610571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.744525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTG GATTTCGCCT GGCGCGACCT TTATCACTCA ACAATCGTGT GATGCTGTTT
GTCGCACTTG CCATTAGTCT CAGCCTTGTT GTAATCGGCC ATCTCGTTCA GAAGTCAGTC
GAACAGCATT TTGCAGAACA AGACGCTGAC GAATTGGTTG TCATCAGCCG TGCCGTGGCA
GAAGCACTAA AAAAGACAAC ACGTTCAGGT CGTTCGGCCG ACGAAACACT TCCTCATGCT
GTTTCCGGTC ATCACGGTGT GTATTATCAG GTTTGGGACG AATCTGGTGC GCTGGTTTAC
GGCCCACATG AAGTAGTTTT TCCTCCCCGA GCTAGATTCA ATGCCCCGGT GTACACTATC
CGCGCCGACA ATCTTGTGAG TTGGCATATT GATGATAAAT CCTATCGAGG CGCGATGACA
CAAGTGCAAA TTGACGGCCG AAACTATCTC GTCACTGCGG CCATCAATAT GGACTTCCAT
ATGCGCTTTC TCGAACATTT CAGCCGCAAT TTATGGTTGA TCATGGCGCT GGCTGGTGGG
CTTACTTTAC TCGCAGCCTG GTACGGTGTG CATCAAGGGC ATGCGCCACT ACGGGCACTC
AGTGAATCCA TACGATCTGT TCAAGCCGAC CAATTGGATA TGCGACTGAA TGAAAAAGCT
GTTCCCATGG AATTGCAACC TCTGGTGGAG TCCTTTAACC AGATGATCAG TCGCCTTGAC
GACAGCTTCA CGCGCCTGTC CCACTTTTCT GCGGACATCG CCCATGAGTT GCGAACACCT
CTTACGAACC TCGCAACGCA AACCCAGGTC GGTTTGGGGC AAGCGAGAAC ACTTGAAGAG
TATCGGGAAT TGCTCTACTC CAATTTGGAA GAGCAAGAAA GATTGACCAA AATGGTAAAT
GACATGCTGT GGCTCGCGCA GAGTGAGAAC GGCCTACTTA AACCCAATTG GGAATTACTG
GATTTGAGGC AAGAAGTTGA AGCCACCTTC GAATTTTTCG AAGCCTTGGC GGAGGATAAA
AAAATTACAT TGGCTGTAGG GGGAGATCGC GTCAACGCGA TGGCCGATCG TTCGATGCTG
CGCCGAGTGA TTTCTAACCT TTTGTCTAAT GCGCTTCGTT ATACACCAGA GAACGAAACA
ATCAATGTCA CTGTTGAGGG GGTTGGCAAT CAGGCCCAAA TAACAATTGA AAACCCGGGG
CAGGGGATTT CTGCAGTGCA TCTACCGAAA CTCTTTGATC GCTTCTATCG GGTTGATCCA
TCGAGGCAGC GTCAGAGCGA GGGGGCAGGC TTGGGTTTGG CGATCGTGAA GTCAATCATT
GAGGCACATG ACGGAAATGT GGAGGTGTCC TCCGAAATGG GTACTACCCG GTTCGTTATC
TCGCTGCCAG CTCATGATAA AAAAGCAGGT TAG
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| Protein sequence | MAFGFRLARP LSLNNRVMLF VALAISLSLV VIGHLVQKSV EQHFAEQDAD ELVVISRAVA
EALKKTTRSG RSADETLPHA VSGHHGVYYQ VWDESGALVY GPHEVVFPPR ARFNAPVYTI
RADNLVSWHI DDKSYRGAMT QVQIDGRNYL VTAAINMDFH MRFLEHFSRN LWLIMALAGG
LTLLAAWYGV HQGHAPLRAL SESIRSVQAD QLDMRLNEKA VPMELQPLVE SFNQMISRLD
DSFTRLSHFS ADIAHELRTP LTNLATQTQV GLGQARTLEE YRELLYSNLE EQERLTKMVN
DMLWLAQSEN GLLKPNWELL DLRQEVEATF EFFEALAEDK KITLAVGGDR VNAMADRSML
RRVISNLLSN ALRYTPENET INVTVEGVGN QAQITIENPG QGISAVHLPK LFDRFYRVDP
SRQRQSEGAG LGLAIVKSII EAHDGNVEVS SEMGTTRFVI SLPAHDKKAG
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