| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1947 |
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| Symbol | |
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| ID | 3967053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2447970 |
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| End bp | 2449853 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637921035 |
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| Product | putative copper resistance transmembrane protein |
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| Protein accession | YP_527419 |
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| Protein GI | 90021592 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.809096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCC CATTTAGCCC CCTCGTCGGC TCCTTGAGTC GTCGGCGTTT TGTTCAAGGC
CTCGCGGTTG GCGGAGTTCT GGCAACCACC CCTGCTGCGT TGCTGGCACG CGAATCAGTT
CAAACTGCTC TGGGTTCAGC CCCTGTGCTC AGCGGCACCG ATATCAATCT GGAAATAGGC
CAATCGCTGG TGAATTTTAC CGGTGTAACC CGTATGGCGA CGACCATTAA CGGCTCCATT
CCCGCACCCA CACTGCGTTT GCGCGAAGGC GATGACGTGA CGATACGCGT CACAAACCGG
CTAAGTGTCC CGACGTCCAT TCACTGGCAC GGCATTTTAT TACCCTTCGA AATGGACGGT
GTTCCGGGTA TCAGCTTTAA GGGGATTGCG CCGGGGGAAA CCTTTGTTTA CCGATTTAAA
CTCCGTCAAA GTGGCACCTA CTGGTATCAC AGTCATTCAG GCTTTCAGGA AATGACTGGG
ATGTACGGTG CGCTCATCAT CGAGCCTCGT TCAGGCGAAA GACACGAGGC CGATCAGGAC
TTTGTCGTAC AACTCTCTGA TTGGACCGAT GAAGATCCGA TGCAGGTATT CAGTAAACTG
AAAGTTCAAG GGGATACTTA CAACTTCAAC CAGCCGACCT TTTTTGACTT CACTCGCGAC
GTGTCTGACA AGGGATTAAA AGCGGCGTTG AGCAAGCGCC AGATGTGGAA CCAGATGCGC
ATGAACCCCA CCGATCTGGC GGATTTATCT ACCGCTACCC TCACCTACCT CATGAATGGT
ACGGCTCCTG CGGGGAACTG GACAGGCGTA TTTAAGAAGG GAGAGCGCCT GCGCCTTCGA
TTCATCAATG CCGCCAGCAA TTCCTTTTAC GATGTTCGTA TCCCCGGTTT GAAACTGACC
GTTGTGCAGG CAGACGGTCA GGACGTGGAG CCCGTTTCCG TGGATGAGTT TCGCTTCGGT
CCCGGTGAAA CCTACGATGT TCTGGTAAGA CCTGATGATG AAGCCTACAC AATTTTTGCA
CAGAGCATGG ATCGCACCGG TTATGCCCGA GGGACCCTGG CTACACGGCA AGGTCTGTCC
GCACCCGTGC CGACCCTGGA CCCAGTGGAG TGGCTGACCA TGCAAGACAT GATGGGGGCG
ATGAACCATG AAGGGATGGG CGACGATGCC TCTATGGAGG GAATGGACCA TAGCAATATG
AATATGGAAA AAATGGATCA CTCGAAGATG GATCATTCGC AAATGGACCA CTCACAGATG
CACGGCGGTA TGGCCATGGA TCACAGCATG CACGGTATGC AACAGGGTTC CCAAAATCCG
CTGGCAAAGC CGTCTACCAG CGTCAATCAT GCTCGAACAG AATATGGCCC TTCTGTCGAT
GCACGGGTGG ATACGCCACG CACTAACCTC GACGACCCGG GTATCGGGCT TCGCGACTTG
GCAGAAAAAG GTTTGCGCCC TGTGAGTCAC AAGGTACTCA CGCTTGCCGA TCTACAATCT
CTCGATGGTG TGCTTGATGA TCACCGAGTA CCCGAAAAAG AATTGGAGCT GCACCTCACC
GGCAATATGG AGCGCTACAG CTGGTCTTTT GATGGGCTGG AATTCGGCCG AAGTACGCCC
GTTTCGCTCA AGCATGGCCA GCGTGTTCGC ATTATCTTGC AAAACGACAC CATGATGACC
CACCCCATGC ATTTGCACGG CATGTGGAGT GAACTGGAAA CCGATCAAGG TGAGCTACGT
GTCCGGCGCC ACACCATCCC GGTGCAGCCC GCACAGCGCA TCAGTTTTCT CACAACGCCA
CATGATTTAG GGCGTTGGGC CTGGCACTGT CACCTCTTGT TCCATATGGA TGCGGGCATG
TTCCGCGAGG TAGTGGTGTC ATGA
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| Protein sequence | MNRPFSPLVG SLSRRRFVQG LAVGGVLATT PAALLARESV QTALGSAPVL SGTDINLEIG
QSLVNFTGVT RMATTINGSI PAPTLRLREG DDVTIRVTNR LSVPTSIHWH GILLPFEMDG
VPGISFKGIA PGETFVYRFK LRQSGTYWYH SHSGFQEMTG MYGALIIEPR SGERHEADQD
FVVQLSDWTD EDPMQVFSKL KVQGDTYNFN QPTFFDFTRD VSDKGLKAAL SKRQMWNQMR
MNPTDLADLS TATLTYLMNG TAPAGNWTGV FKKGERLRLR FINAASNSFY DVRIPGLKLT
VVQADGQDVE PVSVDEFRFG PGETYDVLVR PDDEAYTIFA QSMDRTGYAR GTLATRQGLS
APVPTLDPVE WLTMQDMMGA MNHEGMGDDA SMEGMDHSNM NMEKMDHSKM DHSQMDHSQM
HGGMAMDHSM HGMQQGSQNP LAKPSTSVNH ARTEYGPSVD ARVDTPRTNL DDPGIGLRDL
AEKGLRPVSH KVLTLADLQS LDGVLDDHRV PEKELELHLT GNMERYSWSF DGLEFGRSTP
VSLKHGQRVR IILQNDTMMT HPMHLHGMWS ELETDQGELR VRRHTIPVQP AQRISFLTTP
HDLGRWAWHC HLLFHMDAGM FREVVVS
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