| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1946 |
|---|
| Symbol | |
|---|
| ID | 3967052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2447110 |
|---|
| End bp | 2447973 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637921034 |
|---|
| Product | putative copper resistance protein B |
|---|
| Protein accession | YP_527418 |
|---|
| Protein GI | 90021591 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.300672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAA ATCCCGTAAC CAAACTATGC CAAATCTCTC TGGCTTGCGT ATTAGCAAGT
GGGGCTTACG CAGAGATGGA TCACAGCAAT CACGATCCAG GAGCCCACGA GATGGGGCAA
GCTCAAGGTG GTAAAGCACC TGATAATGCC CGCGATCCCC ACGCTTATTC GGATGGCTTT
ACCTTAACCG AAGGGCCCTA TGCACTGCCC GGGCCCAGAC AATTGAAACT GGCCGATGAG
CATCGCTTTT GGGCAATCAT CAGTGATCGC CTGGAGTACC AGGAAAAATA CGAAAGTACT
GTATTTGATT TGCAGGCATG GTATGGGACC ACCTATAACC GCTTGGTTGT AAAAACCGAG
GGGGACATTG TGGAAGGCAC CCTTGAGGAG AGTTCTACTG ATGTACTGTG GAGCCGAGCC
TTTAATGCGT ATTTTGATAC TCAACTGGGC GCGCGGATTG ATACCTATGA CGAAGGTGAA
GACCGCCAGT GGCTCGCGCT AGGCTTTCAA GGGCTGTCTC CCTATTGGTT TGAACTTGAT
GTCACGGCTT ATCTCGGTGA TGACGGGCGA ACAGCCTTGT CTGCGGAAGC GGAATACGAA
CTCTTGTTCA CTCAACGACT GATACTGCAG CCCAGAATGG AAATAAACCT GTTTGGTAAA
GACGACCCTG AAAATGGGCT TGGCTCGGGC TTAACGAACA TGTCAGCAGG CTTGCGCCTT
CGTTACGAAT TCAGCCGTCA ATTTGCACCC TATATCGGTT TGGAATGGTC AAGATCTTTT
GGCGATACCG CCGATTACCT GCAAGCCGCT GGAAAAGATA AATCCAGTTC CCAAGTACTG
GCGGGTTTGA AGTTTTGGTT TTAG
|
|---|
| Protein sequence | MNINPVTKLC QISLACVLAS GAYAEMDHSN HDPGAHEMGQ AQGGKAPDNA RDPHAYSDGF
TLTEGPYALP GPRQLKLADE HRFWAIISDR LEYQEKYEST VFDLQAWYGT TYNRLVVKTE
GDIVEGTLEE SSTDVLWSRA FNAYFDTQLG ARIDTYDEGE DRQWLALGFQ GLSPYWFELD
VTAYLGDDGR TALSAEAEYE LLFTQRLILQ PRMEINLFGK DDPENGLGSG LTNMSAGLRL
RYEFSRQFAP YIGLEWSRSF GDTADYLQAA GKDKSSSQVL AGLKFWF
|
|---|
| |