Gene Sde_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1943 
Symbol 
ID3967049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2445251 
End bp2445955 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content42% 
IMG OID637921031 
Producthypothetical protein 
Protein accessionYP_527415 
Protein GI90021588 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACTG ATAAACACAT TTGTCCTTAC GGCCTTAAAT CGCGAGACTT GCTCAAGCGT 
GAAGGTTACG AAGTCGATGA TAACCTCCTC ACGTCGCGCA AAGAAACCGA TAATTTCAAA
CAAGAGCACG ATGTGAATAC AACACCGCAA ACTTTTATTG ACGGCAAACG AATTGGCGGA
TATGACGACC TTAAAAAATT CTTTGGCAAG TCGAAAGACG AAAGCAAGGA GACAACTTAT
ACACCAGTGA TTGCCATTTT CAGCATTACA TTTTTAATGG CAGCTGCGTT AACTTGGAGC
CGATTTCAAG GCGTTAACGT ACTATACCTG TTAGAGACAT TCATTGCACT CAGCATGTGT
GCATTGGCCA TTCAAAAACT TCGTGATTTA AATGCCTTCT CTCTGCAGTT TATTACTTAC
GATTTATTAG CGATGCAGTA TGTGCCCTAT GCCTATCTTT ATGCGCTATT AGAAGCTTTC
GCAGGTATTG GAATGTTGAC CGGAATGGCG TCATGGCTAT TTGCTCCACC CGCATTATTT
ATCGGGACGA TTGGCGCTAT TTCTGTCTTT AAAGCTGTTT ACATCGACAA GAGAGAGCTG
AAATGTGCTT GTGTGGGCGG AAACAGTAAC GTTCCCCTGG GGTTCATATC ATTAACTGAA
AATCTAATGA TGATTGCGAT GGGTACCTGG ATGTTGATTA AGTAA
 
Protein sequence
MHTDKHICPY GLKSRDLLKR EGYEVDDNLL TSRKETDNFK QEHDVNTTPQ TFIDGKRIGG 
YDDLKKFFGK SKDESKETTY TPVIAIFSIT FLMAAALTWS RFQGVNVLYL LETFIALSMC
ALAIQKLRDL NAFSLQFITY DLLAMQYVPY AYLYALLEAF AGIGMLTGMA SWLFAPPALF
IGTIGAISVF KAVYIDKREL KCACVGGNSN VPLGFISLTE NLMMIAMGTW MLIK