| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1935 |
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| Symbol | |
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| ID | 3967022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2439347 |
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| End bp | 2441815 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637921023 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_527407 |
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| Protein GI | 90021580 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATC ACTCAAACAA CCATGCCTGT TGCGGTGGCC ACACCCCATC GAATACCGAA
CACCACAATC ACGAAGTTGA TACCAAGCAG ACGCAAAAGT TTTATGTCTG CCCAATGCAC
CCTGAGGTTC GCTCTCCAGA GCCAGGCGAT TGCCCAAAGT GCGGCATGCA CCTGGTTATT
GAAGAGCAAA GCCCCGAAGG AGCTCTGCCA GTAAAAACAA CGGGAGAGCA TGGCCAGCAT
GATTGCTGCT CAAGCAAAAG CGGAGGGCAC CACACTGGCC ATCACTCTCA AAATACAAAT
CAGTCATTGA GTCAATACAA CGACGTGCCA TCCGGCCATA AGGGCGCGGT TTACACCTGT
CCGATGCACC CTGAGGTAAG GCAGACAAAA CCGGGGGTAT GCCCACTTTG TGGTATGGGG
CTTGAACTGG AATCCGCAGC AATGGCGGCG GATGAACCCA ATCCAGAACT CGTGGATTTT
ACACGGCGCT TTTGGGTGGG TGCGGTGCTC ACACTCCCGG TGCTGATACT CACCATGTCG
CCCTTGGTTG GCCTACCTCA ATTACGCGAG ATGCTCGGTG AACACACGGC CATGTGGGCG
GAGTTCATTT TAAGCACGCC CGTTATTCTG TGGTCTGGAT GGCCGTTCTA TGTGCGCGCG
GTTAATTCTT TCCGCACACT CAATCTCAAT ATGTTTTCGT TGATAGGGAT GGGGGTTGCG
GCGGCCTATA TATTTTCCAT TTTCGCGGTG CTTTTACCCG GGATTTTCCC TGAAGGTTTC
AGGAACCCCG AAACCGGTGT GGTAGGCGTG TATTTTGAAG CAGCGGCCGT CATCGTCACC
CTTGTACTTC TGGGTCAAGT GATGGAACTG CGAGCGCGAG AAGGTACTGG CAAGGCTATT
CGCGCGTTAT TGGATCTCGC AGCGAAAACC GCAAGAGTTA TTCGCACGGA TGGCTCGGAA
GAAGAGATTC CGCTGGAAGA TGTGCAGGTC GGTGATCGCA TTCGGGTACG GCCTGGAGAC
AAGGTGCCCG TGGATGGTGT TGTGGTGGAA GGACGGTCTT CTATCGATGA GAGCATGATT
TCTGGCGAGC CAGTGCCCGT TGAGAAAACC GAAGGCGATA ATTTGACTGG CGCAACCATC
AACGGTACGG GCAGCTTGAT TATGGAAGCT ACTCGAGTCG GCTCCGACAC CATGTTGGCG
CAAATCGTCG AGATGGTAGC TGCCGCCCAA CGCTCTCGAG CACCCATTCA AAAATGGGCC
GATATGGTCG CGGGGAAATT CGTTCCTGCT GTCATCGGCG TTGCCATTCT TTCATTTATA
GCTTGGGCCA TTTGGGGTCC AGCTCCAGCC TATGCCTATG CCCTGGTTTC AGCGGTTGCG
GTATTGATTA TTGCCTGTCC CTGTGCCTTA GGTCTAGCCA CGCCCATGTC GATAATGACT
GCCACCGGGC GGGGCGCTCA GGTCGGTGTG TTGATTAAAA ACGCCGAAGC CCTGGAGCGC
TTTGAAAAGG TCGATACCTT AATTGTCGAT AAAACCGGCA CTTTGACTGA GGGTAAACCC
AAGTTGGTGG CTGTGTTGCC AGAAGCAGGG CACGAAGAAA ACGAAGTGCT CAGCTTAGCG
GCTTCGCTTG AGCGTGGCTC AGAACATCCT TTGGCTGAGG CAATCGTACG AGGCGCAGAA
GAACGCGGTA TTACTTTGCA AGAAGCCGAA GATTTCGAGG CGGTTACTGG TAAAGGTGTG
AAGGGCACCG TAAAGGGGCA GTCGGTTGCC TTGGGTAACC TCGCGCTGAT CCGCGACTTG
GGTCTCGAAG CTGAAGCCTT GACGCAAAAA GCCAATACAC GGCGAGATCA AGGTGAAACG
GTGATGTTTA TTGTGCTGGA TGGCGAAGTT GCGGGCCTGG TCAGCGTTGC TGACCCGGTT
AAAGAAACGA CGCCTGCAGC ACTCAAAGCA CTCCATAAAT TGGGCTTTAG AATCATCATG
GCCACTGGCG ACAATCAACG CACCGCGCAG GCTGTCGCGG CAAAACTGGG AATCGATGAA
ATTAGAGCGG ATGTGTTGCC GGAAGACAAA GCGCGCATTA TTAAAGAATT ACAGCAACAG
GGCCGCAAAG TGGCCATGGC CGGTGATGGG GTGAACGATG CCCCGGCCCT TGCGCAAGCG
GACGTGGGCA TTGCCATGGG TACAGGTGCG GATGTCGCCA TCGAAAGCGC CGGTTTTACG
CTCGTCAAAG GCAACCTAGA TGGCATTGTC CGCGCGCGTC GCTTATCTCA TGCCACCATG
AAAAACATTC GTCAAAACCT ATTTTTTGCC TTGATCTACA ACAGCGCGGG CGTACCGGTT
GCCGCAGGTT TGCTGTTTCC ATTTTTCGGC ATTTTGATTA ACCCCATGTT CGCTGCTTTT
GCGATGAGCG CATCATCCAT TTCCGTTGTT GTGAACGCAC TGCGGTTACG AAAAGCGCGA
ATTGAATAG
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| Protein sequence | MSNHSNNHAC CGGHTPSNTE HHNHEVDTKQ TQKFYVCPMH PEVRSPEPGD CPKCGMHLVI
EEQSPEGALP VKTTGEHGQH DCCSSKSGGH HTGHHSQNTN QSLSQYNDVP SGHKGAVYTC
PMHPEVRQTK PGVCPLCGMG LELESAAMAA DEPNPELVDF TRRFWVGAVL TLPVLILTMS
PLVGLPQLRE MLGEHTAMWA EFILSTPVIL WSGWPFYVRA VNSFRTLNLN MFSLIGMGVA
AAYIFSIFAV LLPGIFPEGF RNPETGVVGV YFEAAAVIVT LVLLGQVMEL RAREGTGKAI
RALLDLAAKT ARVIRTDGSE EEIPLEDVQV GDRIRVRPGD KVPVDGVVVE GRSSIDESMI
SGEPVPVEKT EGDNLTGATI NGTGSLIMEA TRVGSDTMLA QIVEMVAAAQ RSRAPIQKWA
DMVAGKFVPA VIGVAILSFI AWAIWGPAPA YAYALVSAVA VLIIACPCAL GLATPMSIMT
ATGRGAQVGV LIKNAEALER FEKVDTLIVD KTGTLTEGKP KLVAVLPEAG HEENEVLSLA
ASLERGSEHP LAEAIVRGAE ERGITLQEAE DFEAVTGKGV KGTVKGQSVA LGNLALIRDL
GLEAEALTQK ANTRRDQGET VMFIVLDGEV AGLVSVADPV KETTPAALKA LHKLGFRIIM
ATGDNQRTAQ AVAAKLGIDE IRADVLPEDK ARIIKELQQQ GRKVAMAGDG VNDAPALAQA
DVGIAMGTGA DVAIESAGFT LVKGNLDGIV RARRLSHATM KNIRQNLFFA LIYNSAGVPV
AAGLLFPFFG ILINPMFAAF AMSASSISVV VNALRLRKAR IE
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