| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1932 |
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| Symbol | |
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| ID | 3967019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2436870 |
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| End bp | 2438183 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921020 |
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| Product | amino acid transporter |
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| Protein accession | YP_527404 |
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| Protein GI | 90021577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.392371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATT CACATTCACC ACATTATCAA AAAAATAGTT TAACCCTGGC TGGTGCCGTT
GCCATGGGTA CCGGCGTAAT GATCGGCGCG GGTATATTTG CTTTAACAGG TCAAGTTGCG
GAGATGGCTA GAGAGTGGTT TCCACTGGCA TTCTTACTTG CCGCTGTTAT TTCGGGTTTC
AGCGCCTATT CCTATGTGAA AATGTCGAGC GCGTACCCGA GTGCGGGCGG GATTGCCATG
TTTTTGGAAA AGGCTTATGG AAAAGGCACA ACGACGGCTG TGTGCGCCTT GCTCATGTAC
TTTTCAATGG TAATTAATGA AAGTTTGGTC GCAAGAACCT TCGCCACTTA TACCTTGCAA
ATATTCGATG CAACTGCTGT TGATTGGCTT GTGCCTGCGT TGGGTTCTGC ATTGCTGCTC
TTCGCATTTA TCGTCAATAT TCTAGGCAAT CGGTTTATTC AAACATTCTC GTTTGTGATG
GGCTTTATCA AAATTGGTGG TCTGGCGTTG CTCGCTATTG GTGGGCTTTG GGTATCGGGC
TTTAATTTCG AAAGCATTTC GGTTAAGCCA GAGGATACGA CCATCAGCGG GTTTTTAGGG
GCAATTGCCT TGGGTATCCT GGCATATAAG GGGTTTACCA CCATTACCAA CAGCGGTGGT
GAAATTAAAG ACCCGCACAA AAATATTGGG CGAGCCATAA TTCTGTCGAT CTCAATTTGT
TTGGTTGTGT ATATGCTGGT CGCCTTCGCG GTGGGCGGAA ACCTGAGCAT CAATGAAATT
GTACAGGCGA AGGATTATGT ATTAGCCGAA GCGGCACGCC CGGCCTTTGG CCAGTACGGC
GTGTGGATTA CTGTGGGATT CGCCATAGTC GCAACGGTTT CCGGTGTGAT TGCCAGTGTG
TTCGCAGTCT CGCGAATGCT TGCCATGCTG ACCGACATGA AACTTGTTCC GCACTCGCAT
TTCGGTATGC CTGGCAGCAT CCAGCAACAC ACTCTGGTGT ATACCATCGT AGTGGCGATG
TTTTTAACAA TATTTTTTGA CTTAAGTCGA ATCGCGTCTC TGGGAGCTAT TTTTTATATC
GTTATGGATA TCGCCATACA TTGGGGCGTT TTGAAAAATT TGAGAAAGGA CGTTAAGGCA
AGCCCCACGA TACTTACCTT GGCAATTGGA TTGGATGTGT TGGTGCTAAT TGCATTTATT
TGGGTAAAAA TTCAGACCGA CATGCTGGTG ATTTGGGCAT CACTCATTGG ATTTATAGGT
ATTTTCCTAG GAGAGTATTT TTTCCTCAAG CACTATCGAA CACAGGATAA ATAA
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| Protein sequence | MQHSHSPHYQ KNSLTLAGAV AMGTGVMIGA GIFALTGQVA EMAREWFPLA FLLAAVISGF
SAYSYVKMSS AYPSAGGIAM FLEKAYGKGT TTAVCALLMY FSMVINESLV ARTFATYTLQ
IFDATAVDWL VPALGSALLL FAFIVNILGN RFIQTFSFVM GFIKIGGLAL LAIGGLWVSG
FNFESISVKP EDTTISGFLG AIALGILAYK GFTTITNSGG EIKDPHKNIG RAIILSISIC
LVVYMLVAFA VGGNLSINEI VQAKDYVLAE AARPAFGQYG VWITVGFAIV ATVSGVIASV
FAVSRMLAML TDMKLVPHSH FGMPGSIQQH TLVYTIVVAM FLTIFFDLSR IASLGAIFYI
VMDIAIHWGV LKNLRKDVKA SPTILTLAIG LDVLVLIAFI WVKIQTDMLV IWASLIGFIG
IFLGEYFFLK HYRTQDK
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