| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1931 |
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| Symbol | |
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| ID | 3967018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2433673 |
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| End bp | 2436792 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921019 |
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| Product | Co/Zn/Cd efflux system membrane component |
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| Protein accession | YP_527403 |
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| Protein GI | 90021576 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.412028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAT CTATTATTCG CTGGTCGATT GGTAATCGGT TTTTAGTGCT GTTGGCAACA
ATGATTCTGA TTGGGGTAGG CCTCTATTCA CTAAAGCAAA CACCCGTCGA TGCTATCCCA
GATTTAAGTG ATGTGCAGGT CATTATTAAA ACCTCTTACC CAGGCCAAGC ACCTCAAGTG
GTGGAAGACC AAGTCACCTA TCCACTGACT ACGGCGATGT TATCGGTACC GGGCGCCGTC
ACTGTGCGTG GCTACTCCTT TTTTGGGGAC AGTTATGTCT ATGTCATTTT TGATGAAGAT
ACCGATTTGT ACTGGGCCCG AAGTCGAGTT CTCGAATATC TAAGTCAAGT CGCTCCCACT
TTGCCGGCAG CGGCGAAGCC CCAGCTCGGG CCAGATGCCA CGGGTGTCGG TTGGGTTTAT
ATTTATTCGC TCATTGATCG CTCCGGTCAA CACGATATTA GCCAACTTCG CAGCCTCCAG
GATTGGTTTT TAAAATACGA ATTGCAAACC GTACCGGGTG TTTCTGAAGT GGCTGCGGTA
GGGGGCATGG TGAAGCAATA TCAAGTCACG GTAAGTCCTG AGAAGCTGCG CGCATTTAAT
ATACCCCTGG CGCACATACA AATGGCGATC AAGCAAGCGA ATCAAGAAGT AGGGGCCTCC
GTAGTGGAGA TGGCGGAAGC TGAATATATG GTGCGCGCTT CTGGATATAT TCAAAACGAG
GCGGATCTCG CAAACATTCC CCTTGGTGTA AATTCAAACG GCACGCCATT GCTGCTAAAA
GATGTGGCCG ATATCGGTAT CGGTCCACAA ATGCGACGTG GTATTGCAGA ATTAAATGGA
GAAGGGGAAA CCGTTGGAGG TGTTGTTGTG ATGCGATTTG GTGAAAATGC GCAAACAACA
ATCAATGGCG TAAAAGCAAA ATTAGAACAG TTACAGGCAG GTCTGCCAGA GGGCGTAGAG
GTTGTCACCG TTTATGATCG CTCAGGATTG ATTGAGCGAG CGGTCGAAAA CCTTTGGCAC
AAACTCTTGG AGGAGTTTGT CGTCGTAGCG TTGGTTTGCA TGATTTTCCT TTTTCATGTT
CGCTCATCCT TGGTGGCAAT TGTCAGTTTG CCGGTGGGAA TATTAACGGC ATTTATCATC
ATGCACGTGC AGGGTATTAA TGCCAACATT ATGTCATTGG GTGGTATTGC AATCGCTATT
GGGGCCATGA TTGATGGTGC GATTGTGATG ATTGAGAATA TGCATAAACA TATGGAGCAT
ACCCCAATCA CCAAAGAAAA TCGCTGGCAA ATTGTCACCG AATCCGCTGT TGAAGTGGGT
CCTGCTTTAT TTTTCAGTTT GTTGATTATC ACGGTGAGTT TTGTACCCGT ATTCACACTG
GAAGCACAAG AGGGTCGTAT GTTTAGCCCG CTTGCCTTTA CTAAAACCTA TGCGATGGCC
GCTTCGGCAG CACTGGCTAT TACTTTGGTG CCGGTATTAA TGGGTTATTT TATTCGAGGC
AAAGTATTGC CCGAGCACAA GAATCCAGTA AACCAATTTT TGATTGCCAG CTATATGCCA
GCGTTAAAAG GCGTCCTTAA ATTTCCCAAA ATCACCATTC TATGTGCCGT GATTGTATTG
GCTTCCGTTT ATTGGCCGTT GCAAAAAATC GGTAGTGAAT TTATTCCACC GTTGGATGAA
GGCGATTTGA TGTACATGCC TACAACATAC CCAGGGATTT CGATAGGCAA GGCGAGAGAA
TTATTACAGC AAACCGATAA ATTGATTGCC TCGGTTCCAG AAGTGGAAAA CGTATTTGGC
AAAATTGGAC GTGCCGATAC GGCAACGGAC CCTGCGCCAT TGACGATGAT AGAAACCTTT
ATTCAACTCA AACCTCGTGA CCAATGGCGA GAGGGTGTGA CAACTGAAAG CCTTAAGAAG
GAGCTTGACG CCTTGGTTAA ACTTCCTGGC GTCACTAATG CCTGGGTTAT GCCCATTAAA
ACACGCATTG ATATGTTGGC GACCGGCATC AAAACACCCG TGGGCATAAA AGTCGCCGGG
CCCGATTTGT CAGTAATTCA GGATTTAGGC AAGCAGCTTG AAAACCTTCT TAAAGATGTT
GAAGGCACTG CATCCGTGTA TTCGGAACGC GTCGCTGGCG GTCGGTATTT GAATATTGAT
ATTGATCGAG CAAAAGCTGC GCGTTACGGT TTGAATATCG CGGATGTGCA ACAAGTGATT
GCGTCTGCAG TGGGAGGAAT GAATGTCACC CAAACCGTGG AAGGACTGGA GCGCTACCCG
GTAAATATTC GTTATCCGCA AGCCTATCGC GATTCGCCAG CGCAATTAGC GCTACTGCCA
ATCGTGACTC CCAAAGGCGA ACGCATCGCT CTGGGCGATG TTGCCAAAGT CAGTATTGCT
GATGGACCGC CTGGCATCAA AAGTGAAAAC GCGAGAATTA ACGGTTGGAC TTTTGTCGAT
ATCGATGGCG TGGATGTGGG TACCTATGTG GAGAACGCAA AAGAAATCGT AGCGAAACAA
TTGGAGCTTC CTGCCGGGTA CTCGATTGGC TGGTCCGGTC AATATGAGTA CATGGTTCGC
GCAAAAGAAA AATTGCAGTA TGTGGTGCCA TTAACCTTAG CCATCATTGC CATTTTACTT
TTTTTGAACT TCAGAAATTT TGCACACGTG GCCATTATTC TAGGCTCTCT GCCCTTGGCC
TTGGTCGGGT CAATCTGGCT GATATACCTA CTCGGCTTTA ATTTCTCGGT CGCCGTTGGT
GTGGGCTTTA TTGCTCTGGC GGGTGTCGCG ACCGAGCTCT CCGTGATCAT GCTGGTGTTT
CTAGAAATAT GTTGGCGTCA ACATATTAAA CGTGCACAAG AGGAGGGTCG CAAGACCAAC
AGTGATGACC TGCACCAAGC GATTATCGAA GGCGGAGCGC TTCGAGTTCG ACCTAAAGTC
ATGACCGCCT CAGCCATTAT CATCGGTTTA CTGCCGATCA TGTATGGCAG TGGCACCGGA
TCAGAGGTGA TGAGTCGCAT TGCAGCCCCA ATGGTTGGCG GTATGCTCAG CGCATTGGTA
TTGACCCTGT TGGTGCTGCC CGCCGTGTAT TTGCTCTGGA AGCGAGCAAC GATCGATTAG
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| Protein sequence | MIESIIRWSI GNRFLVLLAT MILIGVGLYS LKQTPVDAIP DLSDVQVIIK TSYPGQAPQV
VEDQVTYPLT TAMLSVPGAV TVRGYSFFGD SYVYVIFDED TDLYWARSRV LEYLSQVAPT
LPAAAKPQLG PDATGVGWVY IYSLIDRSGQ HDISQLRSLQ DWFLKYELQT VPGVSEVAAV
GGMVKQYQVT VSPEKLRAFN IPLAHIQMAI KQANQEVGAS VVEMAEAEYM VRASGYIQNE
ADLANIPLGV NSNGTPLLLK DVADIGIGPQ MRRGIAELNG EGETVGGVVV MRFGENAQTT
INGVKAKLEQ LQAGLPEGVE VVTVYDRSGL IERAVENLWH KLLEEFVVVA LVCMIFLFHV
RSSLVAIVSL PVGILTAFII MHVQGINANI MSLGGIAIAI GAMIDGAIVM IENMHKHMEH
TPITKENRWQ IVTESAVEVG PALFFSLLII TVSFVPVFTL EAQEGRMFSP LAFTKTYAMA
ASAALAITLV PVLMGYFIRG KVLPEHKNPV NQFLIASYMP ALKGVLKFPK ITILCAVIVL
ASVYWPLQKI GSEFIPPLDE GDLMYMPTTY PGISIGKARE LLQQTDKLIA SVPEVENVFG
KIGRADTATD PAPLTMIETF IQLKPRDQWR EGVTTESLKK ELDALVKLPG VTNAWVMPIK
TRIDMLATGI KTPVGIKVAG PDLSVIQDLG KQLENLLKDV EGTASVYSER VAGGRYLNID
IDRAKAARYG LNIADVQQVI ASAVGGMNVT QTVEGLERYP VNIRYPQAYR DSPAQLALLP
IVTPKGERIA LGDVAKVSIA DGPPGIKSEN ARINGWTFVD IDGVDVGTYV ENAKEIVAKQ
LELPAGYSIG WSGQYEYMVR AKEKLQYVVP LTLAIIAILL FLNFRNFAHV AIILGSLPLA
LVGSIWLIYL LGFNFSVAVG VGFIALAGVA TELSVIMLVF LEICWRQHIK RAQEEGRKTN
SDDLHQAIIE GGALRVRPKV MTASAIIIGL LPIMYGSGTG SEVMSRIAAP MVGGMLSALV
LTLLVLPAVY LLWKRATID
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