| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1929 |
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| Symbol | |
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| ID | 3967016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2430413 |
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| End bp | 2431756 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921017 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_527401 |
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| Protein GI | 90021574 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.845235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCT CTATAAAACC TGTCTCATTC GTGGTAACGC TTTTCCTTCC CCTGATGGGA
TTATTTTCGG TGCCGATATT GGCTGAGACT TACACGCTTC AAGAAGCCAT TTCAAAGGCT
CAATCGCTAG ACCCTTGGAT AACCGGGAGC TTAAAACGAC AGGAAAGTAT TGACGCCAGA
AGCGTCGAGG CAGGGGCCTT ACCCGACCCA CAAATCAATA TGGGTATTGC AAACCTTCCT
ATTGATAGCC TGGACTTTTC TCAAGAGGCG ATGACTCAGT TCAAGGTAGG CGTCAGCCAA
ATGTTTCCCC GTGGAAAAAC GTTATCTCTT CAACAGGAAA AACTACAACG ACTTAGCGAA
ATGCAGCCTC ACGCTCGCGC AGATCGCGAA GCGAAGGTCG CTGTTGTGGT GGCCGAACTT
TGGTTGGAAG CATTTCGCAA CCACCTAAGC ATTCAATTGA TTGAACAGGA TCGAAGTTTA
TTTCAACACC TTGTAGACGT TGCTCAATCC AATTATACCT CCGCATCCGG GCGGACCCGA
CAACAGGATG TTGTACGCGC GCAGCTGGAG CTGACAAGGC TGGATGATCG ACTCACTCAG
CTTTACTTGC AGAGCGATGT CCATCTCGCA AAACTGGCAG AATGGTTAAG TGATCCCGCC
ATATCTTTGT CCGACACGGC ATGGCAATCC GAACCGTCGG CCGTATTGCG TCACCAGGCG
AACCAATCAA GCGGAAACGC CGCCTACCTC AAAACCGTTT CCGAGATATT AATTCAACAC
CCTAGTGTTC TCAGCCTTAA TCAAAAATTA AGTGCATTTG ATTCCGGCGT AGAAATTGCC
AAGCAGTCCT ACAAACCTCA ATGGGGTGTG AATGCCAGTT ATGCTTATCG TGACGATTCT
CCCATGGGCG ATGAGCGTTC TGATTTTTTC TCCGTTGGCG TCACTTTTGA TCTGCCCATT
TTTACCGGTA ACCGTCAAGA CAAACGAGTC CAGTCGGCCA AAGCTGACCT TGAAGAAGTA
AAAACCGAAA AAGTTCTGCT ACTAAGACAG TTAAAAGCGC AACTGGAGTC CACAGAAGCA
AAGTACCTGA GACTGGTTGA ACGTAAAACG CTATTCGAGC AAAGGCTGCT TAAAGAAATG
ACCGACCAAG CCGAAGCATC GCTATCAGCT TATACACATG ATGATGGCGA CTTTGCGGAG
GTTGTTCGCG CCCGTATCGC TGAACTTAAC GCACGGATTG ATGCGCTGAA TATTTCCATA
GATATTCAAA ATGTCGTTGC ACAGCTTAAC TATTTTTATG CAGGCATAAC ATCCTCAACC
GATTTAATTG AGCAATCGCA TTAG
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| Protein sequence | MLPSIKPVSF VVTLFLPLMG LFSVPILAET YTLQEAISKA QSLDPWITGS LKRQESIDAR
SVEAGALPDP QINMGIANLP IDSLDFSQEA MTQFKVGVSQ MFPRGKTLSL QQEKLQRLSE
MQPHARADRE AKVAVVVAEL WLEAFRNHLS IQLIEQDRSL FQHLVDVAQS NYTSASGRTR
QQDVVRAQLE LTRLDDRLTQ LYLQSDVHLA KLAEWLSDPA ISLSDTAWQS EPSAVLRHQA
NQSSGNAAYL KTVSEILIQH PSVLSLNQKL SAFDSGVEIA KQSYKPQWGV NASYAYRDDS
PMGDERSDFF SVGVTFDLPI FTGNRQDKRV QSAKADLEEV KTEKVLLLRQ LKAQLESTEA
KYLRLVERKT LFEQRLLKEM TDQAEASLSA YTHDDGDFAE VVRARIAELN ARIDALNISI
DIQNVVAQLN YFYAGITSST DLIEQSH
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