| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1924 |
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| Symbol | |
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| ID | 3967011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2425862 |
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| End bp | 2426494 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921012 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_527396 |
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| Protein GI | 90021569 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.343626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACAA AAACAAGCTC GCAGCCCCCA CATATGAAAG TAACCGACCA AAAACGTGCG
GCAATCTTAG ACGCAGCTAT TAAGGTGTTT GGGGCACAAG GCTTTGAGCC ATCTAGCATG
GATCAAATAG CAAAAGTTGC AGATGTATCT AAACGCACTG TTTACAACCA CTTTGAAAAC
AAAGAAGCGT TATTTGCGGA AATTTTGAAC CAGCTATGGG AAAGAAGCCC TTTCAAACTA
GACATCGAGT ATCAACCCTC TAAGCCATTA AAGGACCAGT TGACCGACCT ACTTTGGCAA
ACAATCGAGA TGCTTTCTGA GCCAATGTTT CTAAAGCTCG CTAGAGTAGC CATTGCAGAA
ACAATACACT CCCCAGAAAG AGCTCAATGT ATGCTAGACC GCTTAGCGGT GCGAGAAGAA
AGCATTAGCG CGTGGGTCCG CGCTGCAAGC AATGATAAAA AACTCAACGT GGCAGACGTA
TCGTTTGCGG CCAATCAGCT TCATGCCCTT ATAAAAGGCT TTGCCTTTTG GCCACAAATT
ACGCTGAACA GCCCTCCTCT AAACCAAGAG GAACAAAAGC GTGTTGTTGA ATCTGCAGTT
GATATATTTA TTGATACCTA CGCTATAAAA TAG
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| Protein sequence | MATKTSSQPP HMKVTDQKRA AILDAAIKVF GAQGFEPSSM DQIAKVADVS KRTVYNHFEN
KEALFAEILN QLWERSPFKL DIEYQPSKPL KDQLTDLLWQ TIEMLSEPMF LKLARVAIAE
TIHSPERAQC MLDRLAVREE SISAWVRAAS NDKKLNVADV SFAANQLHAL IKGFAFWPQI
TLNSPPLNQE EQKRVVESAV DIFIDTYAIK
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