Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1923 |
Symbol | |
ID | 3967010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2424122 |
End bp | 2425831 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637921011 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_527395 |
Protein GI | 90021568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.285353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAGGCA ATGCGATTAA ATTTACTGAA AGTGGGTATG TGAAGGTAAG TGCACGTAAT AATGAACACG GCGATTTTGT CTGTACTATA GAAGATACTG GTATTGGGAT ATCAAACAAA CAAATGGAAC GCCTATTCAA AAGCTTTACT CAGGCTGATG CTTCAACGAC CAGAAAATAT GGCGGTACCG GTTTAGGGCT AGTGATTTCG CAGCGGCTTT GCAAACTGAT GAATGGGGAT ATATCGGTTC GCAGCCAATT GCATAAAGGA ACATGCTTTA CCGTCTCGTT ATCGCTGCCA GCTACTCAAG AAGTGCAAGA TAAACTAAAA GAGAAGCATA TACTTCAAGA AGATGCAAAA GAATATGATT ACATCGTGTT CGATGCCTCT ACACAGCGCG CGAGCGCAAT AGTAAAGCAA ATGCAGAAGT TTCAGTGTAA TGCTGTTTTT GCAGAAGAAG ATAAGTACGA GGATTTGAAT GCAGCGCTTG CGCAGTTAGT AGATATAGAG ACCAATAAAC CGAAGCTATT TATCATCGAT TCGGACAAGC TAGATACTAA TTTTGCTAGT GCGTTAATTG ATGTTTTAGA AAAAAGAAAA CGCCATGGGG CTAGTGATGG CTTGCTGCTG TTAGCTAATG TTGAGGTAGA TATTGACAGC TGGCGAAATG AAAATCAGCA GGGTTTAATG CCTATTATTG CATATCCCCA CCACATACTA ACGAAGCCTG TTACGCCTAG GCTACTTATT CGAGCAATAA ACCACGCTGT AGTTAATGCC GCGCAGGGGA TAATTCATTC GCCTACACTA GAAGAAAAAG CACTATTACT GGAAAATCGA GAAGAGCAAG AGCGAGCGAT AGTTAGAGTG CCAAGTGAAA ATAGCCCTAA AATATTACTG GTAGATGATA ACGCGGTTAA CCGTGAAGTT ATTTTAGGTA TACTGGAAGA CGAAGATTTT CAAATAGAGA CCGCTGTAAA TGGGCAGGAT GCGCTAGCTG CGTTGACAAG ATCGAGTCTT AATTTCGATC TTATTTTAAT GGACTGTCAA ATGCCGGTAA TGGATGGCTA CAAAGCTACA CGAGAAATAA GAAGTAGTGA AATTTTAAAA CACTATAAAC ATATTCCTAT TATTGCATTA ACTGCAAATG CAATGGCAGG GGACAAAGAA ACCTGCTTGG CTTCAGGTAT GTCCGATTAT TTATCCAAAC CTATTGATGG AGAGCAGTTG CTATTAATTA TAAGTAAATG GATAAAACCG AAATTAGAGG CGGGTAATAC TGAACCATTG AGTTGCGAAT TGAACACAAC CGCGCAAAGT GAAGGCTCTA CAAATACTAA GCCTGTAATA TGGGATTTTG AGACAGTCTT GAAGCGTATA AATAATAAAA CAGAGCGCTT ACAAAAGCTG ATTCAACTTT TTGTAAGCAA CATGCCAGCT AATATTGATA AGCTTAAAAC AATAAATATA ACGGAGGATT GGACTGATGC GCAATATATC GCGCATAGCA TTAAAGGCTC TGCAGCTAAT TTGAGCGCGT TACTTGTCAC AGATGCGGCT GAAGACTTAG AGTTATTGTG TAAGCAAGCA GACGCTTATA TTGATATGGA AGCTTTTAAA GAGTCTTATT TAATTAAAGT ATCAGCATTA AGCGCTAGCT ACAATGAAAC GCTAGTTGAA TTTGACTCGT TTTCAACCAG TAAAAGTTAG
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Protein sequence | MVGNAIKFTE SGYVKVSARN NEHGDFVCTI EDTGIGISNK QMERLFKSFT QADASTTRKY GGTGLGLVIS QRLCKLMNGD ISVRSQLHKG TCFTVSLSLP ATQEVQDKLK EKHILQEDAK EYDYIVFDAS TQRASAIVKQ MQKFQCNAVF AEEDKYEDLN AALAQLVDIE TNKPKLFIID SDKLDTNFAS ALIDVLEKRK RHGASDGLLL LANVEVDIDS WRNENQQGLM PIIAYPHHIL TKPVTPRLLI RAINHAVVNA AQGIIHSPTL EEKALLLENR EEQERAIVRV PSENSPKILL VDDNAVNREV ILGILEDEDF QIETAVNGQD ALAALTRSSL NFDLILMDCQ MPVMDGYKAT REIRSSEILK HYKHIPIIAL TANAMAGDKE TCLASGMSDY LSKPIDGEQL LLIISKWIKP KLEAGNTEPL SCELNTTAQS EGSTNTKPVI WDFETVLKRI NNKTERLQKL IQLFVSNMPA NIDKLKTINI TEDWTDAQYI AHSIKGSAAN LSALLVTDAA EDLELLCKQA DAYIDMEAFK ESYLIKVSAL SASYNETLVE FDSFSTSKS
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