| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1921 |
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| Symbol | |
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| ID | 3966986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2422281 |
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| End bp | 2423108 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921007 |
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| Product | cation efflux protein |
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| Protein accession | YP_527393 |
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| Protein GI | 90021566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000577471 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT TAGATAGGCT CATCGAAATT GCCACCTCGC GCGGCCTGGT TACAACCTTT
CTTATATTGG CAGCAGCTGT AATCGGTCGC TGGACGATTC GACGTTTTAT TGTTAAAAAT
GATGCACTTT CGCCGACATT AAAGGCAAAA TGGGGCAAAC TTGCCCAAAA TCTAATTGTT
TTTCTCACGC TTTTTGCTCT TGTTCTAGAG TGGGCGCCTC AGCTTCGAAC CTTCGCCTTA
TCGCTAACTG CTGTTGCTGT AGCCATTGTC ATTGCTCTTA AAGAGATAAT TCTCTGCTTA
ACTGGTGCCG TTATGCGTAC CAGCTCCTCA GTGAAGGTAG GGGATGTGAT AGATATTCAA
GGCTGTAAAG GGCGGGCGGT TGAGTTGACG CTGCTTAGTA CTATTATTGC GCAGCTGAAT
GATGATGACT TGCCTACTGG GCGTCGCATT ACATTGCCTA ACAGTGTATT TCTGAGCAAT
CACTTCGCTA CTAGTAAGGC GAATACAAAA CTTATCCCGC TAAATATAAG CTTTGTTATG
GAGCCCAACT ATAAGGTGGC TAACAAAGTA AAAGAAGAGC TTGGGTTAGC GCTCAATCGT
GTATGGGAGA GCGTGCAGGC ATCACCAGCA TTTTTGCAAG CTGTGAGTGC GGAATTTAGC
GATAATGCCG ACTTTGAACC GACTATCCGT TTAACAACCG CAAATGACGC CAAGCTGGCG
TTCAAAATCC ATATTTTATG TGCGCCAGAA GACCGCAATA ATGTGGAAAG CAACTTAAGC
GAGTCCTTTT TTACAATCGT CTCACAACTC TCCAGAAAGC CAGATTAG
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| Protein sequence | MEHLDRLIEI ATSRGLVTTF LILAAAVIGR WTIRRFIVKN DALSPTLKAK WGKLAQNLIV
FLTLFALVLE WAPQLRTFAL SLTAVAVAIV IALKEIILCL TGAVMRTSSS VKVGDVIDIQ
GCKGRAVELT LLSTIIAQLN DDDLPTGRRI TLPNSVFLSN HFATSKANTK LIPLNISFVM
EPNYKVANKV KEELGLALNR VWESVQASPA FLQAVSAEFS DNADFEPTIR LTTANDAKLA
FKIHILCAPE DRNNVESNLS ESFFTIVSQL SRKPD
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