Gene Sde_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1920 
Symbol 
ID3966984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2420798 
End bp2421640 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID637921005 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_527392 
Protein GI90021565 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000163065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC TTATTTTGGA CGGCAAAGCA CTTGCTAAAA AAACTGAAGA TGAACTCACG 
CAATGTGTGG ACAAATTAAA AGCAAGTTCG GGCCACACGC CTATCCTCGC AACCATATTG
GTTGGCGATG ACCCAGCCTC TGCCACTTAT GTAAAAATGA AAGGCAATGC GTGTAGCCGT
ATTGGTATGG AATCCTTAAA AGTTGAAATG CCTACCAGTA CCACCACTGA GCAGCTGCTT
GCAAAAATTA ACGAACTCAA TGCGAACCCA GCGGTTCATG GGATATTGTT GCAGCACCCA
GTACCAGAGC AAATTGACGA GCGCGCATGC TTTGATGCAA TTGCTTTGGA AAAAGACGTA
GACGGCGTTA CCTGCTTAGG CTTTGGGCGT ATGGCGATGG GCGAAGAGGC ATATGGCTGT
GCTACCCCTA AAGGTATTAT GCGCCTTCTA GAAGCCTATA ACATCGAACT GAACGGCAAA
CACGCGGTTG TAGTAGGTAG AAGCCCTATT CTTGGCAAAC CGATGGCAGC GATGCTGTTA
AACGCTAATG CGACCGTAAC TATTTGCCAC TCGCGCACAC AAAATTTAGA AGCGCACATT
AAACAGGCAG ATATCGTTGT GGGCGCTGTA GGTAAACCAG AATTTATTAA AGCGGAATGG
ATAAAAGACG GCGCAGTTGT TGTGGATGCG GGTTATCACC CCGGTGGTGT AGGCGACATA
GAACTTGCGC CTTTAGCCGA TCGCGCTGCG GCTATTACAC CAGTGCCTGG CGGTGTTGGC
CCAATGACAA TCAATACGCT TATTTATCAA ACAGTTGATT CTGCGCAAAA GAAATTAGGC
TAA
 
Protein sequence
MSALILDGKA LAKKTEDELT QCVDKLKASS GHTPILATIL VGDDPASATY VKMKGNACSR 
IGMESLKVEM PTSTTTEQLL AKINELNANP AVHGILLQHP VPEQIDERAC FDAIALEKDV
DGVTCLGFGR MAMGEEAYGC ATPKGIMRLL EAYNIELNGK HAVVVGRSPI LGKPMAAMLL
NANATVTICH SRTQNLEAHI KQADIVVGAV GKPEFIKAEW IKDGAVVVDA GYHPGGVGDI
ELAPLADRAA AITPVPGGVG PMTINTLIYQ TVDSAQKKLG