Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1920 |
Symbol | |
ID | 3966984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2420798 |
End bp | 2421640 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921005 |
Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
Protein accession | YP_527392 |
Protein GI | 90021565 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000163065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAC TTATTTTGGA CGGCAAAGCA CTTGCTAAAA AAACTGAAGA TGAACTCACG CAATGTGTGG ACAAATTAAA AGCAAGTTCG GGCCACACGC CTATCCTCGC AACCATATTG GTTGGCGATG ACCCAGCCTC TGCCACTTAT GTAAAAATGA AAGGCAATGC GTGTAGCCGT ATTGGTATGG AATCCTTAAA AGTTGAAATG CCTACCAGTA CCACCACTGA GCAGCTGCTT GCAAAAATTA ACGAACTCAA TGCGAACCCA GCGGTTCATG GGATATTGTT GCAGCACCCA GTACCAGAGC AAATTGACGA GCGCGCATGC TTTGATGCAA TTGCTTTGGA AAAAGACGTA GACGGCGTTA CCTGCTTAGG CTTTGGGCGT ATGGCGATGG GCGAAGAGGC ATATGGCTGT GCTACCCCTA AAGGTATTAT GCGCCTTCTA GAAGCCTATA ACATCGAACT GAACGGCAAA CACGCGGTTG TAGTAGGTAG AAGCCCTATT CTTGGCAAAC CGATGGCAGC GATGCTGTTA AACGCTAATG CGACCGTAAC TATTTGCCAC TCGCGCACAC AAAATTTAGA AGCGCACATT AAACAGGCAG ATATCGTTGT GGGCGCTGTA GGTAAACCAG AATTTATTAA AGCGGAATGG ATAAAAGACG GCGCAGTTGT TGTGGATGCG GGTTATCACC CCGGTGGTGT AGGCGACATA GAACTTGCGC CTTTAGCCGA TCGCGCTGCG GCTATTACAC CAGTGCCTGG CGGTGTTGGC CCAATGACAA TCAATACGCT TATTTATCAA ACAGTTGATT CTGCGCAAAA GAAATTAGGC TAA
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Protein sequence | MSALILDGKA LAKKTEDELT QCVDKLKASS GHTPILATIL VGDDPASATY VKMKGNACSR IGMESLKVEM PTSTTTEQLL AKINELNANP AVHGILLQHP VPEQIDERAC FDAIALEKDV DGVTCLGFGR MAMGEEAYGC ATPKGIMRLL EAYNIELNGK HAVVVGRSPI LGKPMAAMLL NANATVTICH SRTQNLEAHI KQADIVVGAV GKPEFIKAEW IKDGAVVVDA GYHPGGVGDI ELAPLADRAA AITPVPGGVG PMTINTLIYQ TVDSAQKKLG
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