| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1909 |
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| Symbol | |
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| ID | 3966973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2411286 |
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| End bp | 2411495 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920994 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_527381 |
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| Protein GI | 90021554 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00215125 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGATA AGTTAAACGG AACTGTTAAG TGGTTCAACG AGAGCAAGGG TTACGGTTTT
ATTAGTCGTG AAGGCGGCAA CGATCTTTTC GTTCACTTCA GCAATATTAC TGGTAGCGGC
TTTAAAACAT TGAAAGAAGG TCAATCGGTA TCTTTTACCG AAGGCATGGG CCAAAAAGGT
CCTCAAGCAG AGAATGTAGA ACCTCTGTAA
|
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| Protein sequence | MSDKLNGTVK WFNESKGYGF ISREGGNDLF VHFSNITGSG FKTLKEGQSV SFTEGMGQKG
PQAENVEPL
|
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