Gene Sde_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1904 
Symbol 
ID3966968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2405844 
End bp2406668 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content41% 
IMG OID637920989 
ProductKef-type K+ transport system, NAD-binding component 
Protein accessionYP_527376 
Protein GI90021549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC CAACTAAGTT TAGTGTTATT GAAGCGCGCT TCGCAAATTT GCGCAGCAAC 
AAGCTTTTCG AGTCTTTCGT TATTTTTGTT ATTGTCTTCT CGGCGCTGGT TATAGGCGCT
AAGACTTACG ACATTCCAGA TTCTGTTTCT AATGCCGTAG CTGTGCTCGA CTGGTTTATT
ACTGGTTTCT TTTTGGTTGA AATATGTATT CGCTTTCTTG GCGAAGAACA GAAGACGCGA
TTTTTTCGCA GTGGTTGGAA TATTTTTGAC ACCATTATTG TAATGGTTAG CGTAATCCCT
ATTGATGATA GCGAATTAGC TATAGTGGGG CGGTTAATTC GCATATTCCG TGTTCTGCGC
ATGGTGTCTA TTATCCCCGA GCTGCGCATG CTGCTAAACA GCTTGTTAAA AGCTATGCCG
CAGCTTGGTT ATGTTGTGCT GCTCATGTTT ATTATTTTTT ACATCTATGC AGCAGTAGGC
AGTACTTTCT TTGCTACTAT TAATGAAGAC CTTTGGGGCG ATATTACTTT AAGCTTGCTT
ACCCTGTTTA GGGTGATGAC TTTTGAAGAT TGGACCGATG TAATGTACGA AACCATGAAG
GTCTATCCCT TCAGTTGGGC GTACTATATT ACGTTTATAT TCTTCACCGC TTTTGCATTT
CTTAATATGA TTATCGGTAT TGTAGTGAAT GTAATGGAGC AGGAGCATAG AAGTATGGTA
GAGGAGGGGC TTGAAAATGA AGGCCAAGAA CTCGCTGCCA TCAAAGCTGA GCTTGCCGAA
ATAAAAGGTA TGTTAAATAC GCTGGTAAAC CAGCCCTCTA AGTAA
 
Protein sequence
MSSPTKFSVI EARFANLRSN KLFESFVIFV IVFSALVIGA KTYDIPDSVS NAVAVLDWFI 
TGFFLVEICI RFLGEEQKTR FFRSGWNIFD TIIVMVSVIP IDDSELAIVG RLIRIFRVLR
MVSIIPELRM LLNSLLKAMP QLGYVVLLMF IIFYIYAAVG STFFATINED LWGDITLSLL
TLFRVMTFED WTDVMYETMK VYPFSWAYYI TFIFFTAFAF LNMIIGIVVN VMEQEHRSMV
EEGLENEGQE LAAIKAELAE IKGMLNTLVN QPSK