| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1901 |
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| Symbol | |
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| ID | 3966965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2401862 |
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| End bp | 2402353 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637920986 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_527373 |
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| Protein GI | 90021546 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000115972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTACTT TACATACAAA TTTCGGTGAC ATCACCCTAG AGCTTGATTT CGACAAGGCG
CCAAAGACCG CAGCTAACTT TAAAGCCTAT GCTGAAGAAG GCTTTTACGA AGGCACAATA
TTTCACCGTG TTATTAAAGA TTTTATGATT CAAGGTGGTG GTTTCACCGA AGATATGAGT
CAAAAATCAG GTAAAGCGCC TATACAAAAC GAAGCAGACA ACGGTTTAAA AAATGAGCTT
GGCACTATCG CTATGGCCCG CACCATGGAC CCACACAGTG CTTCATCTCA GTTTTTTATC
AACACCAAAA ACAACGATTT CTTAAACTTC AAAAGTAAAG ATATGCAAGG CTGGGGCTAC
TGCGTATTCG GTAAGGTAAC CGACGGTTTA GAAGTAATTA AGAAAATTGA AGCGGTTTCT
ACTGGCAAGC ATGGCGGCCA CGCTGATGTG CCTAACGATG CAGTTATCAT TGAAAAAGTA
ACCGTAGCCT AA
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| Protein sequence | MITLHTNFGD ITLELDFDKA PKTAANFKAY AEEGFYEGTI FHRVIKDFMI QGGGFTEDMS
QKSGKAPIQN EADNGLKNEL GTIAMARTMD PHSASSQFFI NTKNNDFLNF KSKDMQGWGY
CVFGKVTDGL EVIKKIEAVS TGKHGGHADV PNDAVIIEKV TVA
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