Gene Sde_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1894 
Symbol 
ID3966958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2392213 
End bp2392689 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content47% 
IMG OID637920979 
Producthypothetical protein 
Protein accessionYP_527366 
Protein GI90021539 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000730808 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCC AGACCCGAGT GAGTTGTATA AAGAGCATGG TTAGGCGAGT TAAAACCCCT 
TGTATTGGCG TGTGTTCCAC CGGCATTGGC GATAGCGTAT GCCGAGGGTG CAAGCGTTTT
ACGCACGAGG TAATCCATTG GAATGGTTAC ACAGAAGAAG AAAAGGCCCA TATTATTCGA
CGGTTGGATG TGCTCTTGTC GCAAGTGATT TATGGGAAGT TCGCTATAGA TAACCCCGCA
CTACTAGAGC AGGGGCTAAA GCACCAACAT ATTCGCTACG ACCCAATAGC TTCGCCTTCC
ACTTGGCTTT TTACATTGCT AAAAGCAGGT GCGACTCAAA TTAAAGATCT AACTGTATTT
GGGTGCAGGG TATTACCCGA TTGGCGAGGC GTTAGCTTAC CCGAGCTGCG CGATACAATA
GACGCCGACT TTTTTACTCT CTCTCAAGTT CATTATGAAC GTTATTTCCG CGTATAA
 
Protein sequence
MHRQTRVSCI KSMVRRVKTP CIGVCSTGIG DSVCRGCKRF THEVIHWNGY TEEEKAHIIR 
RLDVLLSQVI YGKFAIDNPA LLEQGLKHQH IRYDPIASPS TWLFTLLKAG ATQIKDLTVF
GCRVLPDWRG VSLPELRDTI DADFFTLSQV HYERYFRV