Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1893 |
Symbol | |
ID | 3966957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2389080 |
End bp | 2391704 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637920978 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_527365 |
Protein GI | 90021538 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000010006 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAGAAG CATACCGCGA ACACGTTGCC GAACGCGCAG CACTGGGCAT TCCACCCAAA CCACTTTCTC CAGAGCAAGT TGCCGATTTG GTAGAGCTTC TTAAAAATCC GCCCGCTGGC GAAGAAGAAA CTTTGGTAGA CCTTATCAGC AATCGCGTAC CACCTGGCGT AGATGAAGCT GCATACGTAA AAGCTGGTTT CCTATCTGCT ATTGCTAAAG GCGAAACCAC TTGTTCTCTT ATCAGCAAAC AAGATGCTGT TGTACTGCTT GGCAATATGC ACGGCGGCTA CAACATTGAA ACCTTGGTTG CTTTGTTAGA CGACGCAGAA TTAGCAAGCC TAGCTGCCAA AGAATTAAAA CACACCCTAT TGATGTTCGA CGCCTTCCAC GATGTGGAAG AAAAAGCCAA AGCTGGCAAC GCAAACGCAC AAGAAGTTAT GCAATCGTGG GCAGATGGCG AGTGGTTTAC CTCGCGTGAT GCCGTTGCAG AATCTATCAA AGTTGCTGTA TTTAAAGTAA CTGGCGAAAC CAACACCGAT GACCTTTCAC CAGCACAAGA TGCCTGGTCT CGCCCTGATA TCCCGCTACA TGCATTAGCC ATGTACAAAA TGACCCGTGA CGGTTTAACA CCAGAAGAGC ACGGTGTTAC AGGCCCAATG ACACAAATCA AGAGCTTACA AGACAGCGGC ATTCCAGTTG CTTTTGTTGG CGACGTTGTT GGTACTGGTT CTTCACGTAA ATCAGCTACC AACTCGGTAT TGTGGTTCTT TGGCGACGAT ATGCCTGGCG TACCAAACAA GCGCGGCGGC GGTATTTGTA TAGGTGGCAA AGTAGCCCCA ATTTTCTACA ACACCATGGA AGATGCTGGC GCACTTGTGT TCGAAGCTCC AGTTGATAAT TTGGGCATGG GCGATGTCAT TGAAATCCGC CCATACGAAG GCAAAATTCT TAACGAAGCT GGCGAAACCA TCTCTGAGTT TGAATTGAAA TCTGACGTAT TGTTAGACGA AGTTCGCGCT GGTGGCCGTA TTAACTTAAT TATTGGCCGT GGTTTAACCA CTCGCGCACG CGAATCTTTA GGTTTGCCTG TGTCTGAGTT GTTCCGCGTA CCGCAATCTC CAGCAGATTC AGGTAAAGGC TTCTCTCTAG CGCAAAAAAT GGTTGGTCGC GCATGTGGCC TAGCCGAAGG CAAAGGCGTT CGCCCAGGCA CATACTGTGA GCCACGTATG ACCACAGTAG GCTCGCAGGA CACCACTGGC CCAATGACGC GCGATGAGCT TAAAGACCTT GCATGTTTGG GCTTCTCTGC CGATTTAGTT ATGCAGTCTT TCTGTCACAC TGCGGCTTAC CCTAAGCCTG TAGACATTGA CACTCAGCAC ACCCTGCCAG ACTTTATCCA AAACCGCGGC GGTGTTTCTT TGCGCCCTGG CGACGGTATT ATCCACTCAT GGTTAAACCG CATGTTGTTG CCAGATACCG TAGGTACGGG TGGCGATTCA CACACTCGCT TCCCTATGGG TATTTCATTC CCTGCGGGTT CTGGCCTTGT AGCTTTCGCA GCAGCCACCG GCGTAATGCC GTTGGATATG CCCGAGTCTG TATTGGTTCG TTTTAAAGGT ACCCGTAAGC CAGGCATCAC TCTACGTGAC CTAGTACACG CAATTCCTTA TCAGGCAATC AAAGATGGTT TGTTAACCGT AGAGAAAAAA GGCAAGAAGA ATATTTTCTC TGGCCGCATT CTTGAAATTG AAGGCTTAGA CGACCTAACC GTAGAACAAG CTTTCGAGCT TTCAGATGCC TCTGCCGAGC GCTCTGCTGC TGGCTGTACC ATTCAGCTAC CAGAAGACAA GCTTGCAGAA TACCTGCGCT CTAACATCAC CTTGTTGCGC TGGATGATTT CTGAAGGCTA CCAAGATGTA CGTACCCTTG AGCGCCGCGC ACAAAAGATG GAAGAGTGGC TTGCCAACCC ATCACAGCTT AAAGCTGACG CAGACGCAGA ATACGCAGCG GTTATCGAGA TCGACCTAGA TACCATTACC GAGCCAGTAG TTTGCTGCCC GAACGACCCA GACGATGCAC GCTTGCTATC TGAAGTTGCC GGCGACAAAG TAGACGAAGT GTTCATTGGT TCTTGTATGA CCAACATCGG CCACTTCCGC GCTGCCGGTA AGTTGTTAGA CGCCAACAAA GACGGCTTAA AAACCCGCTT CTGGATGTCT CCTCCAACTA AAATGGATGA GCACACCTTA ATGGAAGAAG GCTACTACAA TATTTACGGC CGCAATGGCG TACGTATGGA AATGCCTGGT TGCTCTTTGT GTATGGGTAA CCAAGCACGT GTAGCCGATG GCGTTACCGT ACTTTCTACT TCTACCCGTA ACTTCCCTAA CCGTTTAGGT AATGGCGCCA ATGTTTACTT AACTTCGGCA GAGTTGGCCG CAGTTGGCGG TATTTTGGGT CGCTTACCCA CCCCGGCTGA GTATATGGAA TACGCTGCGA AAATCGACTC CATGTCCGAT GAGATTTTCC GCTACATGAA CTTCGATCAA ATTGCCTCTT TCACCAAAGG TGCTGAAGAA GGCAAGCGTA TCGCAGCGGT AGAAATTCAA GACGTTGCAA TGTAA
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Protein sequence | MLEAYREHVA ERAALGIPPK PLSPEQVADL VELLKNPPAG EEETLVDLIS NRVPPGVDEA AYVKAGFLSA IAKGETTCSL ISKQDAVVLL GNMHGGYNIE TLVALLDDAE LASLAAKELK HTLLMFDAFH DVEEKAKAGN ANAQEVMQSW ADGEWFTSRD AVAESIKVAV FKVTGETNTD DLSPAQDAWS RPDIPLHALA MYKMTRDGLT PEEHGVTGPM TQIKSLQDSG IPVAFVGDVV GTGSSRKSAT NSVLWFFGDD MPGVPNKRGG GICIGGKVAP IFYNTMEDAG ALVFEAPVDN LGMGDVIEIR PYEGKILNEA GETISEFELK SDVLLDEVRA GGRINLIIGR GLTTRARESL GLPVSELFRV PQSPADSGKG FSLAQKMVGR ACGLAEGKGV RPGTYCEPRM TTVGSQDTTG PMTRDELKDL ACLGFSADLV MQSFCHTAAY PKPVDIDTQH TLPDFIQNRG GVSLRPGDGI IHSWLNRMLL PDTVGTGGDS HTRFPMGISF PAGSGLVAFA AATGVMPLDM PESVLVRFKG TRKPGITLRD LVHAIPYQAI KDGLLTVEKK GKKNIFSGRI LEIEGLDDLT VEQAFELSDA SAERSAAGCT IQLPEDKLAE YLRSNITLLR WMISEGYQDV RTLERRAQKM EEWLANPSQL KADADAEYAA VIEIDLDTIT EPVVCCPNDP DDARLLSEVA GDKVDEVFIG SCMTNIGHFR AAGKLLDANK DGLKTRFWMS PPTKMDEHTL MEEGYYNIYG RNGVRMEMPG CSLCMGNQAR VADGVTVLST STRNFPNRLG NGANVYLTSA ELAAVGGILG RLPTPAEYME YAAKIDSMSD EIFRYMNFDQ IASFTKGAEE GKRIAAVEIQ DVAM
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