| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1892 |
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| Symbol | |
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| ID | 3966956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2387582 |
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| End bp | 2388895 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920977 |
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| Product | high-affinity H+/gluconate symporter |
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| Protein accession | YP_527364 |
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| Protein GI | 90021537 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.328259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTT TCGGTGTTTT AGCGTCAATC GTACTGCTTG TGGGCCTAAT TGTTTGGCTA
AAAATTCACC CCTTTTTAGC ATTTTTGGCC ACCTCTATAT TCGCAGGTAT TATTCTTAAT
ATTCCACTGC AAGATATTCC GCAGGCGATT GAAACAGGCA TAGGTTCAAC GCTTAGCGGT
TTAGTAATAG TTATTTGCGT AGGCGCCATG TTTGGCAAGC TGGTATCAGA AAGTGGTGCA
GCACAAAAAA TAGCACAGGT ATTGATAGGC GCATTCGGCC CCAAGCGCAT CACTTGGGCG
CTTATGCTCA CAGGCTTTAT TGTCGGTATC CCACTGTTTT ACAACGTGGG TTTTGTACTG
TTAGTGCCAC TCGTATTTTC TGTTGTTTAC CAATCTAAGC TGCCAGCCGT TTATTTGGGT
ATCCCATTAC TTGCTGCCTT GTCTGTTACG CATGGCTTTC TACCGCCGCA TCCATCGCCT
ACAGCCATGG TGCCCATGTT CAACGCTGAA TTAAGCACAA CGCTTATTTA CGGTTTAATT
GTGGCAATAC CCACCATGAT TCTTGCGGGA CCGGTGTTTG CCAATGCTTT AAAAAATATT
AAATCGACAC CGCTAGCCAC ATTTACTCCC AAAGACCTAC CTGATAACCA GCTACCTAGC
GCCACCAATG CATTCGCTAC AGCCCTGCTA CCCGTTGTTC TTATTGCTGG ACTATCGTTT
TTGCCGTCGC AGGCAGCAAC TGGCTCGCAG CTACACAACC TATTCACATT CTTAGCCAAT
CCTTCACTCA TAATGCTTGC AGCACTTGCG GTTGCTACTT ACACGCTGGG CATTCGCCAA
AACGTGAAAA TACAAACACT TATGGAAAGG TATGCCGATG CGATAAAAGA CATCTCCATA
ATTATGTTAA TTGTGGCTGG AGCGGGTGCG CTAAAGCAGG TTTTTGTTTT GAGTGGCGTA
AGTTCAGATA TTGGCGCACT GATGCAGAAC TTAGCCATTA ACCCTCTGTT ACTGGGTTGG
TTTATTGCCA CAGTGATACG AATTTGCCTG GGGTCTGCAA CGGTGGCAGG CCTAACCGCT
GCCGGCATAA TGGCGCCAGT TCTGCCCTTG ACCGGCGCCG ACCCGAACTT AATGATTCTT
GCTATTGGCG CGGGGAGCTT GATGTGCAGT CACGTTAACG ACTCAGGCTT TTGGATGTTT
AAGGAGTACT TCAATTTAAG CGTAAAAGAC ACCCTTAAAT CCTGGACATT AATGGAAACC
ATCGTAGGTA TTGGTGGAAT TACAGCGGTA CTCATTCTTG ACGTTTTTGT GTAA
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| Protein sequence | MEIFGVLASI VLLVGLIVWL KIHPFLAFLA TSIFAGIILN IPLQDIPQAI ETGIGSTLSG
LVIVICVGAM FGKLVSESGA AQKIAQVLIG AFGPKRITWA LMLTGFIVGI PLFYNVGFVL
LVPLVFSVVY QSKLPAVYLG IPLLAALSVT HGFLPPHPSP TAMVPMFNAE LSTTLIYGLI
VAIPTMILAG PVFANALKNI KSTPLATFTP KDLPDNQLPS ATNAFATALL PVVLIAGLSF
LPSQAATGSQ LHNLFTFLAN PSLIMLAALA VATYTLGIRQ NVKIQTLMER YADAIKDISI
IMLIVAGAGA LKQVFVLSGV SSDIGALMQN LAINPLLLGW FIATVIRICL GSATVAGLTA
AGIMAPVLPL TGADPNLMIL AIGAGSLMCS HVNDSGFWMF KEYFNLSVKD TLKSWTLMET
IVGIGGITAV LILDVFV
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