Gene Sde_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1887 
Symbol 
ID3966951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2382770 
End bp2383414 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID637920972 
Producthypothetical protein 
Protein accessionYP_527359 
Protein GI90021532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAA CCAAACAAGC GTTAAACGCG CGCTTAGTAA TAAAGGAATC TCTGAATAAC 
CCCAACTGCT TTTTGCCAGA GCCAAATCGT TCAGCCGCTA GGCGTTCTTT GCAGGTAATG
GCCTCAGCCT TTAGCAATTG CAACAACGAA CCGGGTAGCC GTTTTGGCTA CGCCCTACGG
GGCTTTCAAG CATTTTGGTC CTCTTCGGTA TTTTATATCG ACAGACAACC AAAAAGCGCT
TATTCAAGGC TCCCAAAGTT TAAATTTCAG CGCTATGGTT TTACTATGGC CCCCCAAGAA
CACTTCATAC TTGAGTATTA CATGGCCAAT ATTTACCAAA ATGAAAGCAT GCGCAAAACA
CTCGCTAGAT ATATACGCGC GCAAATGGAG CTAGCTGGTG TTACCTATAA CGGGTTAAGC
GTAAAGCTAG AAGAGAAATT CGGCATTGTT CACAACCCCG CTACACTGCG CAACAAAGTG
AACTCTGGCG CACTAGGGGC ACAAATGTTT TTATTTATGG TGTTATGCCT AGAGGTAGAT
ACTCTGCAAA TGCGGGAGCT AGAAAAGATT TACCTTAAAA TTAAAGAAGC TGAAAATAAT
GGGGCAGAAA TGAAAGAGGC AGAAAAACTG CCTCCTATAG ATTAA
 
Protein sequence
MALTKQALNA RLVIKESLNN PNCFLPEPNR SAARRSLQVM ASAFSNCNNE PGSRFGYALR 
GFQAFWSSSV FYIDRQPKSA YSRLPKFKFQ RYGFTMAPQE HFILEYYMAN IYQNESMRKT
LARYIRAQME LAGVTYNGLS VKLEEKFGIV HNPATLRNKV NSGALGAQMF LFMVLCLEVD
TLQMRELEKI YLKIKEAENN GAEMKEAEKL PPID