| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1880 |
|---|
| Symbol | |
|---|
| ID | 3966925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2373493 |
|---|
| End bp | 2374629 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637920965 |
|---|
| Product | cell division protein ZipA |
|---|
| Protein accession | YP_527352 |
|---|
| Protein GI | 90021525 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG3115] Cell division protein |
|---|
| TIGRFAM ID | [TIGR02205] cell division protein ZipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00963367 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT GGATAACAGT CATTATTGTT CTACTTATTG TAGGCATTGT GTTAGATGGA
ATTCGGCGCG TGCGCATCCA TCGCAGGGAA AATATTCGAT TAACTCGTCG CGCTAAATTG
GCCGATGCGG AAGTAGATGC TGTTGCTACT ACCAGTAACA GCGAGTTTCC TTCTGGCGGC
GCGCGCGTTG CTGTCTATCG CAAGCCTGAC GAGGCTGAAA ACATTAACAA GAACGTGCGC
CAATCTTTTA CCTCTAAGCG CACTACAGTT GGTGCGCCTT CGCGTATTCC CGAACAAGTG
AAGCTTAACT TGGATGAAAC TGTACCCATG CTAATGGATT CGGTTGAAGT GGAAGGTAAG
GACGAAGCAG ACGTTGATAT TGATAACGAC TTTGCGTTTG AGCAGGCGAG CGCAGACGAC
TTAGGTGTGT TGGCCTATGC GCCTGGTGAA GAGCAGCATG ATGATCATGA TGATGTTGCG
GTTACCGAAG AATACAGTCA CCAAGAAACC GAACCTTCGC TTGGCTCATT AGACGATATT
GATGATGCAT TAGATGAGCC GCCAGCTCAG CACGCTGCGC CTAGCTATGC CGAGCCGGTT
GAGCAAGTGA GCGCTGCACC GAAAAAAGCA GAACCAGAAA AAGCGCCAGT GGAAAAGCGT
GAGAAAAACA GTCAGCCGGT AGCGAAAGAA GAAAAAGTTA TCGAGCCAGA AGAAGTGCTC
ATTATTAACG TAATGGCTAA AAAAGGTGAG CGCTTTTTGG GTGAAGCTCT GTTGCAGGCG
CTCATGGATC AGCATATAAA GTTTGGTGAT ATGGATATTT TCCATCGTCA TGCAGACGAA
AATGGCGATG GTCCAATTTT GTTTAGCGTG GCCAACATGG TGGTGCCGGG CACGTTTAAC
TTGGCATCTA TGAGCGAGTT TACTACCCCT GGCGTAAGCC TATTTTTAAG CCTGCCAGTA
GAGGCCGAAA GCTTAGTTGC ATTTAATACC ATGGCAGATG CCGCACGCGG GTTAGCCGAT
GCGCTGGGTG GCGAGCTAAA GGATGAAAAC CGCAGTGTAA TGACTAAGCA AACCATAGAG
CATGCTCGCC AAAAGGTGAT GGAATTTGAG CGCAAGCGCA AATTGCGTGC GCGTTAG
|
|---|
| Protein sequence | MPDWITVIIV LLIVGIVLDG IRRVRIHRRE NIRLTRRAKL ADAEVDAVAT TSNSEFPSGG
ARVAVYRKPD EAENINKNVR QSFTSKRTTV GAPSRIPEQV KLNLDETVPM LMDSVEVEGK
DEADVDIDND FAFEQASADD LGVLAYAPGE EQHDDHDDVA VTEEYSHQET EPSLGSLDDI
DDALDEPPAQ HAAPSYAEPV EQVSAAPKKA EPEKAPVEKR EKNSQPVAKE EKVIEPEEVL
IINVMAKKGE RFLGEALLQA LMDQHIKFGD MDIFHRHADE NGDGPILFSV ANMVVPGTFN
LASMSEFTTP GVSLFLSLPV EAESLVAFNT MADAARGLAD ALGGELKDEN RSVMTKQTIE
HARQKVMEFE RKRKLRAR
|
|---|
| |