| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1873 |
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| Symbol | |
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| ID | 3966916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2363543 |
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| End bp | 2364562 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920956 |
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| Product | GGDEF |
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| Protein accession | YP_527345 |
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| Protein GI | 90021518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0147389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTCAG CGCTAAAACC TGAATGGTCT GCTGTGCGTG CAATTGTCAT TGCGTGGCCC
TATGAAGATA GTGATTGGCA AGATAATTAT GCGCAGGCAG AGCAATGTTA TTGGGCCATG
TTGATTGCAT TTTCTACCTA TAGTGACGTA TGGGTGTTGC TGCATTCATC AATAAGCAAG
GCGCAGTGGC TGGAAGATTT AGACAAAGAG TTCGGGCGTT CTGCAGCTAA CGCGCGTCGC
TGTGCGGTAT CTGTTATTGA TAGCATAGAT TACGACGATA CGTGGATTAG AGATTACGGC
CCGTTAACAA CCCATTCCGA TTATGTTTCT TTTTGCTTTA ACGGCTGGGG GGGAAAGTAC
CCCGCGGCGC TAGATACCTT GGTGGGTAAA AAGTTACAGC CTTGGCTTGG TGACGTAGTG
CGCGAAAGCG AATACTTTTT TGAGGGCGGC GCCTTAGAAA TTAACGATAG CGGTGTATTA
CTCGCCAATA AAGACTGCGT AATAGACACC CATAGAAACC CGGGCCTTAA TCAGGCGGCG
GTTGAAGCGA TACTCGCAAA AGAGTTGGGC GTAAAGGCTT TCGCTTGGCT TGAGGGTATT
CAGCTGACGG GTGACGATAC CGATGGCCAT ATCGACACCA TTGCTAGATA CGTTGCAAAC
GACTCTGTGG TGTATTCTGG TCCTAATCCA AGCCACCCAG ATGCGGCTGC TTTACTGGCG
TTAAAGTCGC AAATTAGTGC GTTGGCTGCA GTGCACAACT GGCAATTGGC AGAGCTACCT
ACGCCAATTG TGTATAGTCA GGTGGAGGAA GGGCAGCTGT TGCCGGCCAC TTACGCCAAC
TTTTTAATAT GTAACGATGT GGCTTTTGTG CCCGTTTACG GGGTGAGCGA AGATCAAATT
GCGGTCGACG TGCTAACGAC AGCAATGCCA AACAAAACAA TTGTAACGGT GCGCTGTGAA
GCATTGTTAG AGCAGCATGG CAGCTTACAT TGCGCCACTA TGCAAATAGG TGCAATTTAA
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| Protein sequence | MNSALKPEWS AVRAIVIAWP YEDSDWQDNY AQAEQCYWAM LIAFSTYSDV WVLLHSSISK
AQWLEDLDKE FGRSAANARR CAVSVIDSID YDDTWIRDYG PLTTHSDYVS FCFNGWGGKY
PAALDTLVGK KLQPWLGDVV RESEYFFEGG ALEINDSGVL LANKDCVIDT HRNPGLNQAA
VEAILAKELG VKAFAWLEGI QLTGDDTDGH IDTIARYVAN DSVVYSGPNP SHPDAAALLA
LKSQISALAA VHNWQLAELP TPIVYSQVEE GQLLPATYAN FLICNDVAFV PVYGVSEDQI
AVDVLTTAMP NKTIVTVRCE ALLEQHGSLH CATMQIGAI
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