Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1872 |
Symbol | |
ID | 3966915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2362811 |
End bp | 2363353 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920955 |
Product | heat shock protein DnaJ-like |
Protein accession | YP_527344 |
Protein GI | 90021517 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.506662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGTT TAAAGCTTTT TATCCCTGTT TTTGTGTTTG CTTTTTTGGC CGTGGTGCTT ATGTATGCGC TTATTCGTGG CGATACCGGT CATGTGGAGT CGGCGCTGCT GGATAAACCT GTACCTGAAT TTACTATGCC CTCACTGTTT GACGAAAAGC CAGCTGTGTC GGGCGAGGAA ATTAAAGGTA AGCCCTACTT GCTAAACCTT TGGGGAACAT GGTGTGCGCC GTGTAAGAAA GAGCATCCAG AGTTGGTGGC ACTATCTAAA AAAGGCGTTC GTATTATTGG TGTTAACCAT AAGGACGATA AAGAGCTCGC GTTAAAGTGG CTTGAAGAGC ACCAAGACCC GTACGAAGCA GTTATCTTCG ATGATACCGG TCGTTTTGGC TTAGATTTAG GTATTACGGG GCTACCAGAA ACATTTTTTG TGGATGCTGA CGGCGTTATT CGCTATAAGC ATACCGGACC AATATCTGAA TACATTTGGA ACACTAAACT TGCCAGTCAA TGGCAGGCGC TACAGGCGCC GGCGGCTAAC TAG
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Protein sequence | MERLKLFIPV FVFAFLAVVL MYALIRGDTG HVESALLDKP VPEFTMPSLF DEKPAVSGEE IKGKPYLLNL WGTWCAPCKK EHPELVALSK KGVRIIGVNH KDDKELALKW LEEHQDPYEA VIFDDTGRFG LDLGITGLPE TFFVDADGVI RYKHTGPISE YIWNTKLASQ WQALQAPAAN
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