| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1862 |
|---|
| Symbol | |
|---|
| ID | 3966905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2354630 |
|---|
| End bp | 2355277 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637920945 |
|---|
| Product | protein-methionine-S-oxide reductase |
|---|
| Protein accession | YP_527334 |
|---|
| Protein GI | 90021507 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGT TTTATGCAAA GCCCGAAAAG GCCAAAATGC CCACAGAAAA AACTGCCCTT
AAAGGTCGCA ATGTACCTAT TGAAACCGCA GCAGAGCATT TTGTAAGCGG CATGCCGCTA
GCGCCACCTT ACCCTAGCAA CATGCAGCAA TGTGTGTTTG GACTTGGTTG CTTTTGGGGA
GCAGAGCGTA AATTTTGGCA ATTGCCTGGC GTATATGTAA CCGCAGTTGG CTATAGCGCT
GGGTTTACAC CTAACCCAAC GTATGAAGAA GTGTGCTCTG GCAGTACCGG TCACAATGAG
GTTGTGTTGG TTGTTTACAA CCCATCACAA GTTAGCTTTA AAAAGTTGCT GGCGGTTTTT
TGGGAGTCTC ACAACCCTAC TCAAGGTATG CGGCAGGGCA ATGATTTAGG TACCCAGTAT
CGGTCGGGCG TGTATGTATA TTCCGATGAG CAGGCAGAGC AAGCTGAGCA TAGTAAGCAA
GTTGTTCAAG CAATGCTCAC CGAGAAGGGC TACGGTGAAA TAACAACTGA AATAATTAAA
GCCAAAGAGT TTTACTTCGC AGAGGCTTAT CATCAGCAGT ATTTAGCGAA AAATCCTAAC
GGTTATTGCG GGTTAGGTGG CACCGGTATA GTTGTGCCGT GTGATTAA
|
|---|
| Protein sequence | MSLFYAKPEK AKMPTEKTAL KGRNVPIETA AEHFVSGMPL APPYPSNMQQ CVFGLGCFWG
AERKFWQLPG VYVTAVGYSA GFTPNPTYEE VCSGSTGHNE VVLVVYNPSQ VSFKKLLAVF
WESHNPTQGM RQGNDLGTQY RSGVYVYSDE QAEQAEHSKQ VVQAMLTEKG YGEITTEIIK
AKEFYFAEAY HQQYLAKNPN GYCGLGGTGI VVPCD
|
|---|
| |