Gene Sde_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1858 
Symbol 
ID3966901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2350797 
End bp2351105 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content44% 
IMG OID637920941 
Productmannonate dehydratase 
Protein accessionYP_527330 
Protein GI90021503 
COG category[R] General function prediction only 
COG ID[COG1694] Predicted pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.401436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.311275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATAT CGCACATTCT AGAAGCGTTT TATGCTATTG CCGATAAAGA GGGCTGGCAT 
GGTCATCACA CCCCCAAAAA CCTTGCTGCA GCAATTTCTG TAGAGTCTGC AGAGCTGCTT
GAGCAGTTTA TGTGGCTGGA AGATGGCAAT GAATTAACCG AAACGCAAAA ACAGGCTGTT
GGCCAAGAAA TTGCCGATGT TGCCATGTAC CTTGTGGTGC TGTGTGACAA GCTAGGTTTA
AGCATAGATG AAGTAATAGC GAACAAGCTT GCCTTAAACG CGCAAAGACA TACTAAAACC
ACTAAATAA
 
Protein sequence
MNISHILEAF YAIADKEGWH GHHTPKNLAA AISVESAELL EQFMWLEDGN ELTETQKQAV 
GQEIADVAMY LVVLCDKLGL SIDEVIANKL ALNAQRHTKT TK