Gene Sde_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1839 
Symbol 
ID3966843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2332918 
End bp2333355 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID637920922 
Productperiplasmic protein thiol:disulfide oxidoreductase DsbE 
Protein accessionYP_527311 
Protein GI90021484 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA CCATCAACAG AGACATCACC ATTAATGCGT CAAAAGAACA TATCTATGAC 
GCAATCTCAA ATCCTGAACA CGTAACCAAG TGGTTCCCGA CAACGATCGA GGGAGACTAC
TCAGTGGGCT CGCAACCTAT CTTTGGCTTT GGCGAACACG GCAAAAATCA AATTTACGTT
GTTGCTGCAC GCCCTCATGA GTACTTCGCC TATAGGTGGG TGCCAGGTGC AAATCACTAC
CTTGGCGATG TACTTGCAGT ACCAAATACA TTGGTCGAAT TCAAAATCAC CGAGCTGGCA
GACGACACAT GCAAAGTAAC TCTTACTGAA TCGGGTTTTT CAAGCCTGCC GACAGAACTC
ATGGAAGCGG CATTCAACCA AAACTCCGGG GGTTGGGACT TCATGCTCAG TCGGTTGGAA
TCACTCTTTG ATGCCTAA
 
Protein sequence
MQDTINRDIT INASKEHIYD AISNPEHVTK WFPTTIEGDY SVGSQPIFGF GEHGKNQIYV 
VAARPHEYFA YRWVPGANHY LGDVLAVPNT LVEFKITELA DDTCKVTLTE SGFSSLPTEL
MEAAFNQNSG GWDFMLSRLE SLFDA