Gene Sde_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1836 
Symbol 
ID3966840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2331249 
End bp2331650 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID637920919 
Producthypothetical protein 
Protein accessionYP_527308 
Protein GI90021481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.8678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.603311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAT GGGGGATGGG TGTATTCGAT GATGATACAT CTTGTGATTT ACTCTACGAT 
GCAATGGATA CTGATGCAGG TACATTCATA GCGAAAGCAG TTGGGCACAA AGATTCGGAT
TACCTTGAAT ATGATGATTG TCACGAGGTC ATCGTTTCCG GGGCAATCTT GGATTCCCTT
CTCGTCGGAA CAAAGTACTC GCATGAAACG GAAGGGTACG ATGATTGGCT TTCGAAGCAA
GATAAATCGG CACTATCCAA GTACAAAGAA GATATTGTTT CTGGGTTAAA TTTGGTGCTA
TCGGATAAAT CCGAATTGAA TGAACTGTGG CAAGAAAACG AAGAAGACTA CCCCACTTGG
AAGTCTAATA TTGAAGGCAT TATTGCCAAT CTTCGCAGCT AA
 
Protein sequence
MGAWGMGVFD DDTSCDLLYD AMDTDAGTFI AKAVGHKDSD YLEYDDCHEV IVSGAILDSL 
LVGTKYSHET EGYDDWLSKQ DKSALSKYKE DIVSGLNLVL SDKSELNELW QENEEDYPTW
KSNIEGIIAN LRS