| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1835 |
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| Symbol | |
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| ID | 3966839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2330017 |
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| End bp | 2331150 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637920918 |
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| Product | cytochrome c-type biogenesis protein CcmC |
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| Protein accession | YP_527307 |
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| Protein GI | 90021480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.651715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCT CCTCCTCCGG AGACCAATGG AAACCTTCTA AACTTAAATC ACCACAACAA
AAGTTAATTA AAGAAGGAGA TCATCATATG AGATTTTATA CCATTTCCCA CAAACATTAC
TGCGGAATAG ATTTGCATAC CAAAATGATG TACGTCTGCA TACTTGATTC TGATGCTAAC
ATACTGATTC ATAAGAATAT ACCTACTAAT GGTAAGGCGT TTTTAAAGCT CATAGCCCCC
TATCGTGAAG ACATTGTCGT AGGCGTTGAG TGCATGTTTT CTTGGTATTG GCTGGCTGAT
TTGTGCGCCA AAGAAGGCAT CGAATTTATC TTAGGCCATG CACTTTACAT GAGGTGTATT
CACGGCGGAA AGGCCAAAAA CGATAAAGTT GACTCGGAAA AAATCGCACG CATTATGAGA
GGCGGCGATT TCCCTCTCGC CTATGCCTAT CCTGCCGAGC TTCGGCCTGT TCGCGACCTC
ATGCGTAGAC GAAGCCATTT GGTTCGCATT AAGAGTGAGA TTCAAAGCCA TATTAGTATC
ACCAACTACC AATATAATCT TGAGCCGTTC GACAAAAACA TCGTTCACAA AGGTAATCGC
GAAGGTATAG CAGATCACTT CGATAACGCT TCTGTACGGC TTAATGTTGA AACCGATATT
GCCGTTATGG ACAGCCTTCA CGATCAGATA CGGAACCTCG AAAACTACAT TATCAGGCAT
GCGAAAGACT ACGATGGCCG AATGTTGTAC CGATTAAAAA CAGTTCCTGG GATTGGCGAT
ATTTTGGCTT TAACAATCAT GTATGAAATT CTATCGATCG ATCGTTTTCC AACGGTTCAA
AAGTTTTGTT CATACTCCCG TTTAGTTAAA TGTGCGAATG AGTCGGCTGG CAAAAAAATG
GGGACATCAG GCTCAAAAAT AGGTAACGCT CATCGAAAAT GGGCCTTTTC TGAAGCGGCT
ATTTTATTCA TACGTGGAAA TGATAAAGCT CAGAAATATG TTACTAAATT AAGCAAGAAG
TTTGGCAAAG GTAAAGCGCT GTCCATACTA TCCCACAAAT TGGGACGCGC TATTTATTTT
ATGATGAAAA GGAACGATGT CTTTGATATG AATTACTTTT TTCGAAATAG TTAA
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| Protein sequence | MMTSSSGDQW KPSKLKSPQQ KLIKEGDHHM RFYTISHKHY CGIDLHTKMM YVCILDSDAN
ILIHKNIPTN GKAFLKLIAP YREDIVVGVE CMFSWYWLAD LCAKEGIEFI LGHALYMRCI
HGGKAKNDKV DSEKIARIMR GGDFPLAYAY PAELRPVRDL MRRRSHLVRI KSEIQSHISI
TNYQYNLEPF DKNIVHKGNR EGIADHFDNA SVRLNVETDI AVMDSLHDQI RNLENYIIRH
AKDYDGRMLY RLKTVPGIGD ILALTIMYEI LSIDRFPTVQ KFCSYSRLVK CANESAGKKM
GTSGSKIGNA HRKWAFSEAA ILFIRGNDKA QKYVTKLSKK FGKGKALSIL SHKLGRAIYF
MMKRNDVFDM NYFFRNS
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