Gene Sde_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1817 
Symbol 
ID3966801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2310113 
End bp2310910 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content38% 
IMG OID637920900 
Producthypothetical protein 
Protein accessionYP_527289 
Protein GI90021462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGT CACATATGGA TGCAGTTGAA AAATACTTGG TTTATAAGTC GAAAGTTTTA 
GCAAATGCTG GCCATACGTT GCATAAGGGT ACTCCGCGTG AAAGCTTTGT AAAAGAGTTC
TTGGTAGATC ATCTTGGCTC AGACGTTTCT GTTGGGACAG GCGAAATAAT CGATTGTGAT
TCTCAACCAA GTTCGAGCCG CAATCAGTAC GATATTGTAA TTTACAGAAA TGATTTTCCA
AAACTTGAGT TTTATGGTGG AATAAATGGA TTTTTAATTG AGTCTGTAGT CGCGACGGTC
GAAGTTAAAT CATTGCTAAA TGAGGCAGGA ATTCTTCAGT CGGTGAAAGC TGCAAAAAAT
GCAAAGGCGC TTTCTCCTAG CGTTAAGCAG GGAAGTCGTT TTGGTTGGGT TCCCCCTAAA
GTAGCAAATT ATGTTGTAGC TTACGATGGT CCTGCAAAAA TGAGCACAGT TTATGACTGG
ATTGTAAAAG CGCACACAGA ATTAGCAATT CCAATGCCAA CATTTGCACA TTTAAATAGA
ATCGGAGTTT CCGGCACTGC TTTGGACGGA GTTTTTTTAT TAAATAAGGG GTTTGTTAAG
CTGGATAATT CACCGCTCTC TTTAAATGAT GACAATAATC CGAAGCCGGG AACACATGTG
ATATCTGATT CAGATAGTGG AAATCTACTT ATGTTTTTCC TTGCGTTACA TGAAATATGT
AATAATTTAC AAGCCAAGTT GTTAGATCCG GTTCCTTATG TGCAGTCCGC GGATTATAAA
AATATAACAG TAGTATAG
 
Protein sequence
MLKSHMDAVE KYLVYKSKVL ANAGHTLHKG TPRESFVKEF LVDHLGSDVS VGTGEIIDCD 
SQPSSSRNQY DIVIYRNDFP KLEFYGGING FLIESVVATV EVKSLLNEAG ILQSVKAAKN
AKALSPSVKQ GSRFGWVPPK VANYVVAYDG PAKMSTVYDW IVKAHTELAI PMPTFAHLNR
IGVSGTALDG VFLLNKGFVK LDNSPLSLND DNNPKPGTHV ISDSDSGNLL MFFLALHEIC
NNLQAKLLDP VPYVQSADYK NITVV