Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1811 |
Symbol | |
ID | 3966756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2303357 |
End bp | 2304595 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920894 |
Product | addiction module toxin, Txe/YoeB |
Protein accession | YP_527283 |
Protein GI | 90021456 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.556262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAATC TGCTTCCTAT TGTAATAGGC TTGCGCTACA CAGGCGCGAA ACGCAAAAAA AGCCAACTTA TCTCTTTTTT ATCGGGTATT TCTATTGCCG GCTTAGTGGT GGGGGTTGGT TTGCTTATTA CCGTGCTATC GGTAATGAAT GGGTTTGATC GAGAGCTGCG TGAAAATATT CTTGGTTTGG TGCCTCAAGC AGTAATAAAT CATCAAGAGG GCATAGCCGA ATGGCAACCA TTAGTTGATG AGTTAACGGC AGACAAAGAC ATACTCGCCG CCGCCCCCTA TGTGCAAACC TACGGTTTGG TCGCGCTGGG TAAACAAGCC GAGCCCGTTG TGCTTTACGG CGTAGAGCCA GAATACGAAG TACGTGTTTC GCGCATAACC GATTTTATTG CCGCCGATGT GCTAGCAAGC ATAGAGCAGG GCGAGCCAAG TATTTTACTA GGCAAAGACC TCGCCGCTAC ATTAAATGTT AGCGTTGGCA ATAAAGTTAT GATGGTAGTG CCGGGTGCCG ACGGCGGGCG CGCAGCCCCC AAAACCGGCT ATTTTAAAGT GGTGGGCTTA GTAGATTCCA AAACGGAGTT GGATGCCACA CTTGCAATTA CCTCTCTAAC TCACAGTCTT CCCTTAACTT CACACCCCAA TGCCGTTACC GGTGTGCGCC TAAAGCTAAA TAATTTGTTC GATGCACCTT ATGTGGTTTA TCGCCATCTA CTTGAGCTTG GTCCAGGGTA TTCCGGCAAT AATTGGACGC GTACCCACGG TAATCTTTAC CACGCTATTA AAATGTCGAA GAGTTTAGTT GGGCTGCTCA TGTCGCTAGT TGTGGCAATT GCTGCATTTA ATGTTGTATC TACATTGGTG TTAGTAGTAG TAGATAAACA AGGCGATATA GCTATATTGC GTACCCTAGG TATTTCTACC AAGCAAATAA TGGCCATTTT TATTACACAG GGTACAGCCA TTGGCCTAAT TGGTACCTCG TTAGGCTTGG CGGTAGGGTG TGTGCTTTCG CTATTAGTAC AAAACCTTGT ACGCATAATT GAGGCTGTAT TCGGCGTACA ATTTTTAAAA TCTGATGTTT ACCCGCTCAC TTATTTACCT AGCGAAATAT TGCTACAAGA TATTCTCGCT GTTGGCATTA CCGCATTTGT AATGTGTTTT TTAGCAACCT TATACCCCGC ATGGAAAGCC AGTCGCGTTC AGCCTGCAGA TGCGCTTAGG TATGAGTAG
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Protein sequence | MLNLLPIVIG LRYTGAKRKK SQLISFLSGI SIAGLVVGVG LLITVLSVMN GFDRELRENI LGLVPQAVIN HQEGIAEWQP LVDELTADKD ILAAAPYVQT YGLVALGKQA EPVVLYGVEP EYEVRVSRIT DFIAADVLAS IEQGEPSILL GKDLAATLNV SVGNKVMMVV PGADGGRAAP KTGYFKVVGL VDSKTELDAT LAITSLTHSL PLTSHPNAVT GVRLKLNNLF DAPYVVYRHL LELGPGYSGN NWTRTHGNLY HAIKMSKSLV GLLMSLVVAI AAFNVVSTLV LVVVDKQGDI AILRTLGIST KQIMAIFITQ GTAIGLIGTS LGLAVGCVLS LLVQNLVRII EAVFGVQFLK SDVYPLTYLP SEILLQDILA VGITAFVMCF LATLYPAWKA SRVQPADALR YE
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