| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1792 |
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| Symbol | |
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| ID | 3966718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2283584 |
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| End bp | 2284159 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637920875 |
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| Product | hypoxanthine phosphoribosyltransferase |
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| Protein accession | YP_527264 |
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| Protein GI | 90021437 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00418451 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGTAT CTAATTTCGA AAATGCCATT AAAACGGCAA CATGTTTATA CACACTAGAG
CAAGTTGAAG CTTCCATAGC AAAAATAGGC GATTCTCTAA ACAATGAATT TGCCGATTAT
ATAAGTGAGA GTGGCGTACC AGCTAAAGAT ATGGCGCTAC TTACTATTAT GAATGGTGCT
ATGGTTTTTG CGGGCAAGTT GTTACCGAAA CTTAAGTTCT CTATAGAAGT CGATTACATT
CACGCTACAC GCTACGGCAA TGGTACCCAA GGCGGTGCCT TAGCTTTACT TGCTGAGCCT
AAAATAGAGT TGCAAGGCAA AACAGTTTTG CTAGTAGATG ATATTTTTGA TGATGGCATT
ACCATCGATA GAGTAAAGCA GTATTGTTTA GACCGTGGCG CAGAATCTGT ACGAACCGTG
GTGCTCGCCT ACAAAGATAA AACGCGAGAA GGTTTGGCTC AATTGGTATC ACCCCCCGAT
TTTGTTGGTT TTAATGTGCC AGATAAATAT GTATTTGGTA TGGGGATGGA TGCCGAAGGC
CTGCTGCGTA ATGCGCCCGG TATTTATTAT TTTTAG
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| Protein sequence | MDVSNFENAI KTATCLYTLE QVEASIAKIG DSLNNEFADY ISESGVPAKD MALLTIMNGA
MVFAGKLLPK LKFSIEVDYI HATRYGNGTQ GGALALLAEP KIELQGKTVL LVDDIFDDGI
TIDRVKQYCL DRGAESVRTV VLAYKDKTRE GLAQLVSPPD FVGFNVPDKY VFGMGMDAEG
LLRNAPGIYY F
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