| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1787 |
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| Symbol | |
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| ID | 3966713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2279267 |
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| End bp | 2279872 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920870 |
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| Product | LexA repressor |
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| Protein accession | YP_527259 |
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| Protein GI | 90021432 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.916871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAAAT TGACAACGCG TCAACAGGAA GTACTAGACC TAATAAAAAG TCACATAGAA
GACACCGGTT ACCCACCTAC TCGGGCAGAA ATAGCCAATC AACTCGGCTT TCGCTCTGCT
AATGCGGCCG AAGAACACCT TAAAGCCTTA GCCCGCAAAG GCGCTATTGA AATGGTACCA
GGTGCATCGC GCGGTATTCG CTTACCAGAA ACCATTCAAG GCATTCCATT AATTGGCCGA
GTGGCGGCAG GTAACCCAAT TTTGGCAGAG CAGAATATTG AAGATTACTG CGACGTCCCC
CCCGACTTTT TCTACCCTCA AGCAAACTAC CTTTTAAAAG TACAGGGTAT GAGTATGCGC
GATGCGGGTA TTTTAGATGG CGACTTACTT GCTGTGCACA GCACAACACA AGTAAAGAAT
GGCGATATTG TGGTAGCCCG TATAGAAGAT GAAGTTACGG TTAAACGCTT TAAGCGCGAA
CGCAACAACG CAACCATCCA ATTACTTCCT GAAAACCCAG ACTTCAATAT TATTGAAGTG
GATTTACGGG ATGCAAACTT TTCTATTGAA GGCCTAAGCG TAGGCATTAT TCGTCGAGAG
TTATAA
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| Protein sequence | MYKLTTRQQE VLDLIKSHIE DTGYPPTRAE IANQLGFRSA NAAEEHLKAL ARKGAIEMVP
GASRGIRLPE TIQGIPLIGR VAAGNPILAE QNIEDYCDVP PDFFYPQANY LLKVQGMSMR
DAGILDGDLL AVHSTTQVKN GDIVVARIED EVTVKRFKRE RNNATIQLLP ENPDFNIIEV
DLRDANFSIE GLSVGIIRRE L
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