Gene Sde_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1777 
Symbol 
ID3966703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2267852 
End bp2268124 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content49% 
IMG OID637920860 
Productlipoprotein releasing system, ATP-binding protein 
Protein accessionYP_527249 
Protein GI90021422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000908291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTT ACCACTTCAC GCTTTTTTCA ACACTCGGTT GCCATCTATG CGAGGTGGCG 
CAAAGTGTTT TGGTGCATGC TGCTTGCATT GATGAAGCCT CCATTGGCGT TTGCGACATA
GCCACAGATG ACGAGCTAAT AAAGCTATAT GGCGAGAGCA TACCAGTGCT ACAGCATAAT
AATTCTGGGC TAGAGCTTAA ATGGCCGTTT GACGAAGATA CTTTACAGGA ATTTATGAGA
GGGCTGCCCG AGGCTGGCTC GGGCGAGCAG TAG
 
Protein sequence
MPVYHFTLFS TLGCHLCEVA QSVLVHAACI DEASIGVCDI ATDDELIKLY GESIPVLQHN 
NSGLELKWPF DEDTLQEFMR GLPEAGSGEQ