Gene Sde_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1773 
Symbol 
ID3966699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2263475 
End bp2264386 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID637920856 
Producthypothetical protein 
Protein accessionYP_527245 
Protein GI90021418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.600035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTT CTATTCTAAC CATTATTCTA AAAGCAATTA TTGCTATAGG CTTTGTTGTA 
GCGCTGTTTG TTTGGCTGGC TGCCCACTAT CAAATGAGCG ACTTAACCGA GCAGTGGCTG
CGCCTGCCAG GCAGCTTAGT GGTAATGGCT AGCCTAATGA TTATTGCCAG CCATGTAATA
AGAGCTATGC GAGTGCATTT TGCCTATAGC CTTGTTTGCC CTCAGCCGCT CGCTCGCGTG
CTAAGTGTTA GCCTCGTTCA CAATACCGTT AGTTTTTTAT TGCCCATGCG CTTAGGCGAA
GCCGCCCTGC CGGTGCTGAG TAAACAGCAG CTAGACGTGG ATATTAAATA CTCCACGGCA
ACATTAGTAC TAATACGTTT ATTTGATGCC CACGTGTTAC TTTGCCTATT GTGCTTTTTT
GCGGGTGGCT TGTTTTTAGA AGGCGCAGCG TGGATTGCCC CCATTGTATT AGTAGCTGGC
TTACCGGTAT TTATTTATTT GCTGCGCGCC ATTAGCCACC GCGTACCTAA AATAGCCTTC
GCAAAACCAC TATTCGCCAG CCACCCCAAT TGGCTGCGGT TGTACGCCTA TACCATTGCC
ATATGGATAA TAAAGCTATT CGCACTGGCA ATGCTTGCCG CCACACTAGG TAACTTGCCC
ATTGACCATG CGTGGATAGC CACTATCATA GCCGACGGCA GCGCCTTATC CCCCTTAACG
GGGTTGGCAA ATGCGGGCAC TTTTCAGGCA GCTTTTAGCC TACCGCTGTT ACCATTAGGG
TACAATGCGC AGCAACTTGT GCTTATCGCC GTAAATGTAC ACGTATTTAT TTTTATCATT
AACATGCTTG CGGGCATTTC TGGGTTTATT GGCTTGCGAT CGCGCGCCAC ACCACCCACT
TCGCATTCTT AA
 
Protein sequence
MSRSILTIIL KAIIAIGFVV ALFVWLAAHY QMSDLTEQWL RLPGSLVVMA SLMIIASHVI 
RAMRVHFAYS LVCPQPLARV LSVSLVHNTV SFLLPMRLGE AALPVLSKQQ LDVDIKYSTA
TLVLIRLFDA HVLLCLLCFF AGGLFLEGAA WIAPIVLVAG LPVFIYLLRA ISHRVPKIAF
AKPLFASHPN WLRLYAYTIA IWIIKLFALA MLAATLGNLP IDHAWIATII ADGSALSPLT
GLANAGTFQA AFSLPLLPLG YNAQQLVLIA VNVHVFIFII NMLAGISGFI GLRSRATPPT
SHS