| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1769 |
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| Symbol | |
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| ID | 3966675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2257587 |
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| End bp | 2258270 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920852 |
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| Product | NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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| Protein accession | YP_527241 |
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| Protein GI | 90021414 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0165224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTA ATACATTGTT TAACACGCTT TTACGCCGCC CCGAAACCTG GGCATTTTTG
GCCTGCGTAG TAGTATTCTT AGCGTGGCCA CAACTGGATT TAATAGTCGC TTCTGCTTTT
TATGAAAATG GGCGCTTCTA TGCAAACGAC TACCCAATAG TACGTGCTAT TTACTGGTTT
TTTGCCCGAG TCCACTTTTT ATACCTGCTT GGTTTTATAG CTGCCATTGT GTTTTTTAGC
GTGCGCAAAC AACCAGTAAA ACGCAAAGCC ACAGTATTTT TATTGCTTTC GTTAATACTT
GGGCCGGGTA TTTTGGTAAA CACCATACTT AAAGATAATT CACTGGGCAG GCCACGCCCC
GTACATATTC AAGAGTTTGG TGGCGAATTT ACCTGGACAC CGGTGTTTCA CTACTCTGGC
GAATGCAAAA AGAACTGCTC TTTTGTGAGT GGCCACGCTG CTATTGGCTT TTACTGGTTA
GCCTTTGCAT GGCTGGGGCG ACGCAAACAA TGGCTTATTG CCGGTTTTAC TATGGGCGCA
ATTGTTGGTT TTACCCGCAT AATTCAAGGT GGCCACTTTT TAAGTGATGT AATTTTCGCG
GGTTGGTTTA CTTACTTTAC CTACGCGTTA ATCGCATACT TTTTAGGGCT TTCGCCAGTT
CAAAACAAAA AACAAACCTC CTAA
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| Protein sequence | MQINTLFNTL LRRPETWAFL ACVVVFLAWP QLDLIVASAF YENGRFYAND YPIVRAIYWF
FARVHFLYLL GFIAAIVFFS VRKQPVKRKA TVFLLLSLIL GPGILVNTIL KDNSLGRPRP
VHIQEFGGEF TWTPVFHYSG ECKKNCSFVS GHAAIGFYWL AFAWLGRRKQ WLIAGFTMGA
IVGFTRIIQG GHFLSDVIFA GWFTYFTYAL IAYFLGLSPV QNKKQTS
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