| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1753 |
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| Symbol | |
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| ID | 3966561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2237679 |
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| End bp | 2239679 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920836 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_527225 |
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| Protein GI | 90021398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAC TTTTTAAAGT TAAAAGTAAG TACACTCCCG CAGGCGATCA GCCCACAGCG
ATTGAGGGCT TGGTTAAAGG TATAGAAGCG GGGCTAGCGC ACCAAACATT ACTTGGTGTA
ACAGGCTCAG GTAAAACTTT TACTATTGCC AATGTTATAG AGCGCATAGA TAGGCCCACG
CTTGTTATGG CGCACAACAA AACCTTGGCG GCACAGTTAT ACGGGGAGTT TAAAGACTTC
TTCCCAGATA ATGCTGTTGA ATATTTTGTA TCTTATTACG ACTACTACCA GCCAGAGGCT
TATGTTCCGT CTTCGGATAC ATTTATCGAT AAAGATGCCT CGGTTAACGA TCATATAGAA
CAAATGCGCT TATCGGCTAC CAAAGCCTTA ATGGAGCGTA AAGATGCCAT TGTAGTGGCC
ACTGTGTCTG CCATTTACGG TTTGGGCGAC CCAGAATCGT ATTTGAAAAT GATTTTGCAT
TTAAATCGTG GCGATACCAT TGATCAGCGC CAAATTTTGC GTCGGTTAGC CGAAATGCAA
TACACCCGCA ATGATATCGA CTTTCAGCGC GGTACGTATC GTGTGCGCGG TGATGTAATT
GATATTTTTC CCGCAGATTC AGAGCTAGAA GCGTTAAGAG TAGAGCTGTT CGATGAAGAA
GTGGATAACC TTTCTATATT CGACCCCCTT ACCGGTGAAG TTTTCCGCAA GGTGCCGCGT
TTTACGGTAT ACCCCAAAAG CCATTACGTG ACGCCGCGCA ATAAAATTAT CGACGCTATT
GATGAAATAA AAGAAGAGTT AGCCGAGCGC TTACAGCAGT TGCGCGAAAA CGATAAATTG
GTGGAGGCGC AGCGCTTAGA GCAGCGTACC CGCTACGATT TAGAAATGAT GCAAGAACTG
GGTTACTGCA ATGGCATAGA AAACTATTCC CGTTATTTGT CGGGTCGTGA CTCTGGTGAG
CCGCCACCCA CTTTATTCGA TTACCTACCT GCAGAAGCCT TATTGGTAAT TGATGAATCT
CACGTAACCG TGCCGCAAAT TGGCGCCATG TACAAAGGCG ACCGCTCGCG TAAAGAAACC
TTGGTGGAAT ATGGGTTTAG ATTGCCCTCG GCGCTAGATA ACCGCCCAAT GCGTTTTGAT
GAGTGGGAAG CGCGTGCACC ACAAATGATT TTTGTGTCGG CCACACCCGG CAAGTACGAA
GCAGAGCATC AAGGCCAAGT GGTGGAGCAG GTTGTACGAC CAACAGGCTT GTTAGACCCC
ATCATCGAAG TGCGCCCCGC TACTAGTCAG GTGGATGACG CCATGTCTGA AATCACCAAG
CGTGTAGCGT TGGAAGAGCG GGTATTAATT ACCGTGCTTA CCAAACGTAT GGCAGAAGAT
TTAACTGATT ACCTGCAGGA GCACGGTGTT CGTGTGCGCT ACTTGCATTC AGATATCGAC
ACCGTAGAAC GGGTAGAAAT TATCCGCGAT TTACGTATTG GCGAATTTGA TGTGCTGGTA
GGTATCAACC TTTTGCGAGA AGGTTTAGAT ATGCCCGAAG TGTCTTTAGT GGCTATTTTT
GACGCTGATA AAGAGGGTTT CCTTCGCTCC GATCGTTCAC TTATTCAAAC CATTGGTCGC
GCTGCACGTA ACGTAAACGG CAAGGCGATA CTTTACGCCG AACGCATAAC GGACTCTATG
CGCAGAGCTA TAGATGAAAC CGAGCGTCGC CGCCAAAAAC AAATAGACCA CAACGAAAAG
CATGGCATAA CGCCAATAGG CATAACTAAA AGTATTGCCG ATATTATGGA AGGGGCGAGG
GCGCCAGGTT CGAAAAGTAG TAGCCGCAAG CGCGTAGCCG ATAAAACGAA AGATTACGAA
GTGGATATGA ACAGCAGCAA AGATATTTGG AAAACAATCC AAGTAATGGA GAAAGATATG
TTCCAGGCAG CCAAAGATTT AGAGTTCGAA AAAGCTGCCC AACTGCGCGA TAAAATCAAT
TCACTTAAAG CAAAAATATA A
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| Protein sequence | MSKLFKVKSK YTPAGDQPTA IEGLVKGIEA GLAHQTLLGV TGSGKTFTIA NVIERIDRPT
LVMAHNKTLA AQLYGEFKDF FPDNAVEYFV SYYDYYQPEA YVPSSDTFID KDASVNDHIE
QMRLSATKAL MERKDAIVVA TVSAIYGLGD PESYLKMILH LNRGDTIDQR QILRRLAEMQ
YTRNDIDFQR GTYRVRGDVI DIFPADSELE ALRVELFDEE VDNLSIFDPL TGEVFRKVPR
FTVYPKSHYV TPRNKIIDAI DEIKEELAER LQQLRENDKL VEAQRLEQRT RYDLEMMQEL
GYCNGIENYS RYLSGRDSGE PPPTLFDYLP AEALLVIDES HVTVPQIGAM YKGDRSRKET
LVEYGFRLPS ALDNRPMRFD EWEARAPQMI FVSATPGKYE AEHQGQVVEQ VVRPTGLLDP
IIEVRPATSQ VDDAMSEITK RVALEERVLI TVLTKRMAED LTDYLQEHGV RVRYLHSDID
TVERVEIIRD LRIGEFDVLV GINLLREGLD MPEVSLVAIF DADKEGFLRS DRSLIQTIGR
AARNVNGKAI LYAERITDSM RRAIDETERR RQKQIDHNEK HGITPIGITK SIADIMEGAR
APGSKSSSRK RVADKTKDYE VDMNSSKDIW KTIQVMEKDM FQAAKDLEFE KAAQLRDKIN
SLKAKI
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