| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1748 |
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| Symbol | |
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| ID | 3966556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2227421 |
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| End bp | 2232304 |
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| Gene Length | 4884 bp |
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| Protein Length | 1627 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920831 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_527220 |
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| Protein GI | 90021393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCA ATTTTGACAC GCTTGGGCTT ATTGAAATCC TACAGGAAAA CGCAGAGCAT
CACTTTAAAG ATGGAGCGCC ACCAGCGTTT AGAACGTTTG TTAGTTTATT TCTTAAACAC
TACCCACTTG ATGCTTGGCA ATCTAGGCCG GTTACAGATT TATTCGGTTG CTGTTTTGGC
TTGTGGCACT ACCTACAAAC GTCGGTTGTT AACGGCGAGG CGAGGGTGGC GGTATTTAAC
CCAAACCTAG AAGAGCATCG CTGGGAGTGT GGCCGCACAG TCGTCATGGT TTTACAGCAA
GATATGCCTT TTTTAGTGGA TTCACTAAGG TTAGAGCTAC AGCGTCAAGG GGCACAAATT
CACACCATAA AAAGCACCGT GTTAGGTGTA CATAGGTGCG AAGATGGCAG TGTTGATAAG
CTAGTCGCTG ATACTTCGGT AAGCTCTTCA TCGAATACCC AAAATGGCGA AGTGCAATAC
TCCAAAGAAG CGCTTATTTA CATTGAAATT AGCCTTCGCC CAACAGAGGC AGAGCACACT
CGGCTTATAA ATGCTTTAAA TATTGTCTTA CGCGATATTA AGCGAGTGGT AGACGATTAC
AAGCCAGTAC TGGGTAAGCT CGAACAGGTT AAAGAAAACT TAACAGCCGC AAACGTACCC
AATGAGAATG TGGCGTTTTT ACAGTGGCTA GCGAACGGTC ATTTTTCATT TTTGGGCTAC
CGTGAATTCG ACTATGCCGC CACAGATGGC AAGTCGGGTT TGGTTGAGCG TGTGGATGAG
CGCCTAGGTA TATTTAAAAA AATTGCAACA GAGCAAAATT TTGTTGCTGA AGAAAACTTT
GCTACGGGTA CCGACCAGTT TTATACCCGC GATGATGTGA TTTGTTTTTC TAAGTATTCA
ACGCGCTCTA ATGTACATCG CGGGGTATAC CCTGATTACA TAGTAATTAA AAAATACAGT
TCCCAGGGCG AAGTGGTGGG AGAGTACCGC TTTTTAGGTT TGTTTACCTA TAGCGTATAT
ACCTTATCGC CCTTAGAGAT ACCGTTAGTG CGCAACAAGG TGCAGGCGGT TGTTGAATAT
TCTGGGTTAG ACCCTGCTAG TCATAGCGGT AAAAATCTTC GCCGTGTTAT TGAAAATTTT
CCGCGAGATG AGCTATTTCA AAGTGATCAA AAAACATTAA ACGAAAGTAT TGTTGCTGTA
GCAGATATTA ATGAGCGCCA CGTAGTGCGT TTGCTAATGC GAAAAGACCC ATTTGGGCAC
TTTGTGAATT GTTTGGTTTA TGTGCCTAGA GAGGTATACA CCACCCGTAT TCGAGAAAAA
ATAGAAGCGA TTATAGGCGA ACACTTACAA TCTGGCGATT GTGATTCTAC GACGTATTTT
TCTGAATCTG TACTGGCTCG TGCGCACATA GTGTTCAAAA TTGATAAGGC GCAATGCCCG
CTTCTGAATG TTGAAAAAAT TGAATCCGAA ATTGTAGCGA TTACGCGCAA TTGGGATGAT
GGCCTGCTAT CTTTGTTAGT AGAGAAGTAC GGCGAATCTA ACGGTGTTGC GCTAAACCAA
GTTTACAAAA ATGCTTTTTC GCCTGGCTAC CAAGAAAACT TCAATGCGCG GGCTGCCGCA
CACGATATCG ACTTGGCCGA ATCGTTAGAA ACCTCTGCCA GTATCGCAAT GAACTTTTAC
CAAACTGTGG GCGACGAGGA AAATACAATA CGGTTTCGCG TAATGCGCAT GGAAAACCCG
ATCGAGTTAT CGGATGTGAT TCCAATAATT GAAAACCTTG GCTTACGCGT GTTAGGAGAG
AGGCCCTACA AAATATTACG CCAAGGCAAA CCTATGGTGT GGTTGCACGA TTTCGAGCTT
AAGTACGGGC TGTCGAATAG CGTTGATGTA CACTCGGTAA GGAATTTGTT TGAGCAAGCA
TTCTTGGCGG TTTGGAATAA AGCCACTGAA AGCGATGACT TTAATCGCTT AGTGTTAGGG
GCGAGAATAA ATTGGCGAGA AGTGAATTTA TTGCGCGTAT ACGCCGCATA TATGAAACAA
ACAGGGTTTA ACTCAAGTCA AGACTATATA GCAAACACAT TGGCCAGCCA TTTAGATGTT
ACCCGTAATT TGGTGGCGCT GTTTAAAGCC TACTTTGACC CAAGGCTACA CAAGCAAGAT
AAAAAAGATG ATCAACGTAT TAAGCGCTTA ACCGACAACA TTCTAGAGCA GTTAGATGCG
GTGAGTAACT TAAACGAAGA CCGTGTGTTG CGCAGATACT TAGAAATGTT TGAAGGGAGT
TTGCGCACTA ACTTCTTCCA AAAAGATGAG CAGGGCAACC CTAAGCCTTA TGTTGCTGTT
AAGTTTAGCC CGCGCAAAAT ACAGGGTATT CCCGAGCCTC GCCCTTTATA CGAAATATTT
ATGTATTCGC CTCGCGTTGA GGGTGTACAC CTGCGCGGTG GAAAAGTAGC TCGCGGTGGT
TTGCGCTGGT CGGATAGGTT GCAGGATTAT CGCACCGAAG TGCTGGGGCT TGTGAAGGCT
CAGCAAGTTA AAAATGCAGT GATTGTACCT AATGGGGCTA AGGGCGGTTT TGTTGCTAAA
AAGCTTACCT CTAGTATGTC GCGCGATGAA TTTATGGCGG AGGGAATTGC CTCTTATCAA
ACCTTTATTC GCGCCTTGTT AGATATAACC GATAACGTAC ACGGTGAAGA AATTACTTCG
CCAGTTAACG TCGTTAAACG CGATGAAGAT GACCCTTATT TAGTGGTCGC GGCCGATAAA
GGCACTGCAA CGTTTTCGGA TATCGCGAAC GAAATATCCC TAGAGTACGG CCATTGGCTG
GGCGACGCCT TTGCTTCTGG CGGCAGCCAA GGCTACGACC ACAAGGGTAT GGGGATAACG
GCGCGCGGCG CGTGGATTTC GGTGCAGCGC CACTTTAGAG AGCGTGGTAT AGATATACAA
AAAGAAGATT TTACCGCAAT AGGCATTGGC GATATGGCCG GCGATGTTTT CGGCAACGGC
ATGCTGCTGT CGGAACATAT TTGCTTGGTG GCCGCATTTA ACCATATGCA TATATTTATC
GACCCAACAC CCAATGCCGC AACAAGTTTT GCCGAGCGCA AACGGTTATT CGAAACCCCT
AGAACCAATT GGGCCGATTA CAATACAGAG CTTATTTCTA AAGGGGGCGG GGTGTTTTCT
CGCGATGCTA AATCGTTAAA AATCACCTCG GAAATGAAAA AAGTCTTCGA TATAGCCGAA
GATACCTTAA CGCCCACAGA ACTAATAACG GCTTTGTTAA AAGCGCCAGT AGATTTACTT
TGGAATGGCG GCATAGGCAC CTATGTTAAA GCAGCAAGCG AAAGCCATGC GCAAATTGGT
GATAAAGCCA ACGATGCTTT ACGGGTGGAT GGAGCGCAGC TGCGCTGTAA AGTGTTTGGC
GAGGGCGGTA ACTTAGGTAT GTCGCAGCTG GGCAGGGTGG AGTTTTGCTT AAATGGTGGA
GCTTGTAATA CCGATTTTAT TGATAATGCA GCAGGCGTTG ATTGCTCTGA CCACGAAGTT
AATATCAAAA TATTGCTAGA TAAATTAGTG CGCGAGGGCG ACCTCACTCA AAAACAACGC
AATGCTACAC TCGAATCCAT GACCGATCAG GTGGCGGATC TTGTATTACA AAACAACTAT
CGGCAAACGC AGGCCATAAG TCTTGCGCGT TTTCAGGTTG GCAACCGCGT AAATGAATAT
CGCCGCTTTA TTACTTATTT AGAGGCAAAA GGTAAGTTAA ATAGAAAGTT AGAGTTTTTG
CCAACTGATG AGCAAATAGT TGAACGCCAC GGGCATAACC AGCAACTTAC GCGGCCAGAG
CTAAGTGTGC TTATCTCGTA CGCCAAAGTA GTATTAAAAG AGGCGTTGAT AGCAACAGAT
ATATCCAAAG ATGAATACGT TGCAGCAGAG GTAGAAACAG CCTTTCCACA GTTGCTACGC
GAAAAATATA AGCAGGAAGT GTATCAGCAC AAGTTATTAC CTGAAATTGT AGGTACCCAA
ATAGCGAACG ATCTTATTAA TAATTTGGGT ATAACTGCAG GTCACAGGCT GCTAGAAACA
ACAGGCGCAA ATATTTCGGA AATTGCCAAG GCGTATATTG TGTCTCGCGA TGTGTTTCAG
TTTAACGCTT TTCTTGAATA TATTAAGTCG TTAGATAATA AGGTAACGGC TGAATTTCAA
GCGGAACTGT TAGGTAAAAT GGTGCGCAGG GTACGCCGCG GTACGCGCTG GTTTTTACGC
AACCGCAGGG CGGGCATTAA CGCACGCAAA GAAATAGAAA TATTTAAAAC GGGAATAGAA
GCAATAAACG ATTTAACCGA AGATGTTGTA GATGGCCGAG CAAGGGCGGA TTGGGCTGCT
CGCTACCAAC GTTTGGTAGA TAGAGATGTG CCAGCAGTGT GGGCCAAGCG TTTAGCTATG
CCAGATAACT TGTTTTCTGG CTTAGGTGTT GTGGAGGCTA CTATCGTTGC GAATGTAGAT
AACCAGCAGG TGACAGAAGT ATTTTATTTA TTGCTCGATC GGCTCAGTCT AAACTGGTTT
GCATCACAGC TGTCAGATGT AAAAGTGGAA ACCTATTGGC AGGCGCTGGC TAGGGAATCG
TATATAGATG ATTTAGAAGC CCAGTTGCGC AAGCTAATAA TAAGCCTTGT GCGCCTTAAA
GAGTCGCGAA GCTGGGACGA AACAATCAGC CTTTGGGAAG TTGCAAACAA GGACTTGATC
GAAAGGTGGC GCTCTATGGT TACAGAGGTG GAGGGCACAT CATCCACCGA TTACGCCATG
TTTGCCGTGG CGCTGCGCGA ATTAATTGAT TTAGCGCAGG CTACAGATCA CTGCCAAAAG
CTGGAATCAA TTGCTAATGG CTAG
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| Protein sequence | MIANFDTLGL IEILQENAEH HFKDGAPPAF RTFVSLFLKH YPLDAWQSRP VTDLFGCCFG
LWHYLQTSVV NGEARVAVFN PNLEEHRWEC GRTVVMVLQQ DMPFLVDSLR LELQRQGAQI
HTIKSTVLGV HRCEDGSVDK LVADTSVSSS SNTQNGEVQY SKEALIYIEI SLRPTEAEHT
RLINALNIVL RDIKRVVDDY KPVLGKLEQV KENLTAANVP NENVAFLQWL ANGHFSFLGY
REFDYAATDG KSGLVERVDE RLGIFKKIAT EQNFVAEENF ATGTDQFYTR DDVICFSKYS
TRSNVHRGVY PDYIVIKKYS SQGEVVGEYR FLGLFTYSVY TLSPLEIPLV RNKVQAVVEY
SGLDPASHSG KNLRRVIENF PRDELFQSDQ KTLNESIVAV ADINERHVVR LLMRKDPFGH
FVNCLVYVPR EVYTTRIREK IEAIIGEHLQ SGDCDSTTYF SESVLARAHI VFKIDKAQCP
LLNVEKIESE IVAITRNWDD GLLSLLVEKY GESNGVALNQ VYKNAFSPGY QENFNARAAA
HDIDLAESLE TSASIAMNFY QTVGDEENTI RFRVMRMENP IELSDVIPII ENLGLRVLGE
RPYKILRQGK PMVWLHDFEL KYGLSNSVDV HSVRNLFEQA FLAVWNKATE SDDFNRLVLG
ARINWREVNL LRVYAAYMKQ TGFNSSQDYI ANTLASHLDV TRNLVALFKA YFDPRLHKQD
KKDDQRIKRL TDNILEQLDA VSNLNEDRVL RRYLEMFEGS LRTNFFQKDE QGNPKPYVAV
KFSPRKIQGI PEPRPLYEIF MYSPRVEGVH LRGGKVARGG LRWSDRLQDY RTEVLGLVKA
QQVKNAVIVP NGAKGGFVAK KLTSSMSRDE FMAEGIASYQ TFIRALLDIT DNVHGEEITS
PVNVVKRDED DPYLVVAADK GTATFSDIAN EISLEYGHWL GDAFASGGSQ GYDHKGMGIT
ARGAWISVQR HFRERGIDIQ KEDFTAIGIG DMAGDVFGNG MLLSEHICLV AAFNHMHIFI
DPTPNAATSF AERKRLFETP RTNWADYNTE LISKGGGVFS RDAKSLKITS EMKKVFDIAE
DTLTPTELIT ALLKAPVDLL WNGGIGTYVK AASESHAQIG DKANDALRVD GAQLRCKVFG
EGGNLGMSQL GRVEFCLNGG ACNTDFIDNA AGVDCSDHEV NIKILLDKLV REGDLTQKQR
NATLESMTDQ VADLVLQNNY RQTQAISLAR FQVGNRVNEY RRFITYLEAK GKLNRKLEFL
PTDEQIVERH GHNQQLTRPE LSVLISYAKV VLKEALIATD ISKDEYVAAE VETAFPQLLR
EKYKQEVYQH KLLPEIVGTQ IANDLINNLG ITAGHRLLET TGANISEIAK AYIVSRDVFQ
FNAFLEYIKS LDNKVTAEFQ AELLGKMVRR VRRGTRWFLR NRRAGINARK EIEIFKTGIE
AINDLTEDVV DGRARADWAA RYQRLVDRDV PAVWAKRLAM PDNLFSGLGV VEATIVANVD
NQQVTEVFYL LLDRLSLNWF ASQLSDVKVE TYWQALARES YIDDLEAQLR KLIISLVRLK
ESRSWDETIS LWEVANKDLI ERWRSMVTEV EGTSSTDYAM FAVALRELID LAQATDHCQK
LESIANG
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