Gene Sde_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1744 
Symbol 
ID3966552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2223324 
End bp2224349 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content45% 
IMG OID637920827 
ProductBatB protein, putative 
Protein accessionYP_527216 
Protein GI90021389 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGT TTGCGCATCC GCTTGTATTT TTAATTCTGC CACTCCCCTT GTTAATTGCT 
TTGCTAATTC CAAAAGCAAC TACACGCACC AGTGCACTAA AAGTACCGTT TTATAAAAAT
GTACAGGCAT TACAGCTTGG CACCAGCACC CCTGGCGCAG GCCAAAACAT ATTTTTTCGT
ATACTCGCGG TTTGTGTATG GCTGCTGTTG GTAACAGCTG CCGCAAAACC CGTTTGGATT
GGTGAAGAAG TACACCTACC AACTACCGGC CGAGATTTAT TAGTTGCTGT AGATATTTCA
GGCAGTATGG ACACCAAAGA CATGGTTGTT CAAAACCAGC AAATTCCACG TATCGCTGTG
GTTAAACATA TTGTTGGCGA CTTTATAGAG CGCCGTGTTG GCGACAGACT TGGCTTAGTT
TTATTCGGCA CCTCAGCTTA CTTACAGTCC CCGCTTACTT TTGATCGCAC AACGGTAAAG
CAACTTTTAG TTGAATCGCA AATAGGTTTC GCAGGCCCTA ATACAGCCAT TGGCGATGCC
ATTGGGCTAT CTATTAAACG CCTGCGCGAT AGGCCAGCCG AGAACCGCGT AGTTATACTG
CTAACAGACG GCCAAAATAC CGCCGGTGAA GTATCCCCTA GGCAAGCAGC CGATCTTGCG
AAGCAATCTG GCGTAAAAGT TTACACCATT GGTGTAGGCG CAAATGAGAT GATTGTAAGC
GATGGTTTTT TTGGTAATTT CCAGCGAAAA ATTAATCCAT CGCGCGATTT AGATGAAGAC
ACTCTTACTT ATATTGCAGA GACAACCGGT GGCCGCTACT TTAGAGCGCA CTCACCGCAA
GAGCTAAATC AAATCTACCA ACTATTAGAC GAGCTAGAAC CCGTAGAACA AGAACAGCAA
ACCTTAAAGC CCATTAGCTC GCTGTATATG TGGCCGCTAG CTTGTGCATT GTTGCTTAGT
TTTTTACTGG GGTTAGCGCC TATGATTTCC ACTTTTTTCA CCAGTCGTCA CGAGGTGAAC
CAATAA
 
Protein sequence
MFEFAHPLVF LILPLPLLIA LLIPKATTRT SALKVPFYKN VQALQLGTST PGAGQNIFFR 
ILAVCVWLLL VTAAAKPVWI GEEVHLPTTG RDLLVAVDIS GSMDTKDMVV QNQQIPRIAV
VKHIVGDFIE RRVGDRLGLV LFGTSAYLQS PLTFDRTTVK QLLVESQIGF AGPNTAIGDA
IGLSIKRLRD RPAENRVVIL LTDGQNTAGE VSPRQAADLA KQSGVKVYTI GVGANEMIVS
DGFFGNFQRK INPSRDLDED TLTYIAETTG GRYFRAHSPQ ELNQIYQLLD ELEPVEQEQQ
TLKPISSLYM WPLACALLLS FLLGLAPMIS TFFTSRHEVN Q