Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1744 |
Symbol | |
ID | 3966552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2223324 |
End bp | 2224349 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920827 |
Product | BatB protein, putative |
Protein accession | YP_527216 |
Protein GI | 90021389 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAGT TTGCGCATCC GCTTGTATTT TTAATTCTGC CACTCCCCTT GTTAATTGCT TTGCTAATTC CAAAAGCAAC TACACGCACC AGTGCACTAA AAGTACCGTT TTATAAAAAT GTACAGGCAT TACAGCTTGG CACCAGCACC CCTGGCGCAG GCCAAAACAT ATTTTTTCGT ATACTCGCGG TTTGTGTATG GCTGCTGTTG GTAACAGCTG CCGCAAAACC CGTTTGGATT GGTGAAGAAG TACACCTACC AACTACCGGC CGAGATTTAT TAGTTGCTGT AGATATTTCA GGCAGTATGG ACACCAAAGA CATGGTTGTT CAAAACCAGC AAATTCCACG TATCGCTGTG GTTAAACATA TTGTTGGCGA CTTTATAGAG CGCCGTGTTG GCGACAGACT TGGCTTAGTT TTATTCGGCA CCTCAGCTTA CTTACAGTCC CCGCTTACTT TTGATCGCAC AACGGTAAAG CAACTTTTAG TTGAATCGCA AATAGGTTTC GCAGGCCCTA ATACAGCCAT TGGCGATGCC ATTGGGCTAT CTATTAAACG CCTGCGCGAT AGGCCAGCCG AGAACCGCGT AGTTATACTG CTAACAGACG GCCAAAATAC CGCCGGTGAA GTATCCCCTA GGCAAGCAGC CGATCTTGCG AAGCAATCTG GCGTAAAAGT TTACACCATT GGTGTAGGCG CAAATGAGAT GATTGTAAGC GATGGTTTTT TTGGTAATTT CCAGCGAAAA ATTAATCCAT CGCGCGATTT AGATGAAGAC ACTCTTACTT ATATTGCAGA GACAACCGGT GGCCGCTACT TTAGAGCGCA CTCACCGCAA GAGCTAAATC AAATCTACCA ACTATTAGAC GAGCTAGAAC CCGTAGAACA AGAACAGCAA ACCTTAAAGC CCATTAGCTC GCTGTATATG TGGCCGCTAG CTTGTGCATT GTTGCTTAGT TTTTTACTGG GGTTAGCGCC TATGATTTCC ACTTTTTTCA CCAGTCGTCA CGAGGTGAAC CAATAA
|
Protein sequence | MFEFAHPLVF LILPLPLLIA LLIPKATTRT SALKVPFYKN VQALQLGTST PGAGQNIFFR ILAVCVWLLL VTAAAKPVWI GEEVHLPTTG RDLLVAVDIS GSMDTKDMVV QNQQIPRIAV VKHIVGDFIE RRVGDRLGLV LFGTSAYLQS PLTFDRTTVK QLLVESQIGF AGPNTAIGDA IGLSIKRLRD RPAENRVVIL LTDGQNTAGE VSPRQAADLA KQSGVKVYTI GVGANEMIVS DGFFGNFQRK INPSRDLDED TLTYIAETTG GRYFRAHSPQ ELNQIYQLLD ELEPVEQEQQ TLKPISSLYM WPLACALLLS FLLGLAPMIS TFFTSRHEVN Q
|
| |