Gene Sde_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1724 
Symbol 
ID3966530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2197971 
End bp2198555 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID637920805 
ProductATPase 
Protein accessionYP_527196 
Protein GI90021369 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAA CAGCGTTTGG TTCTATAGGC GAGGCAGCAG TGGCAGCAAA AATTGGGTTG 
ATCTATGGCA GTGACGACGG CAACACAGAA ACAATTGCGT TTCGAATTCA GGCGCGCTTA
GGCGAAGAGA ATGTAGATGT GTTGGACGTA AGCGACGTAA CGCAAATGGA TTTTGCCAGT
TATGACAAGC TCATACTGGG CATACCAACT TGGGATTTCG GTCAAATCCA ATCCGACTGG
GAAGATTTCT GGGACGATGT GAAAGAGGTA GGGTTTGAAG GGAAAACCGT GGCGTTATTC
GGCTTGGGGG ATCAGTTTGG TTATGGGGAT TTCTTCCTTG ATGCCATGGG CATGCTGCAT
GACGTGATAG TTGAAAATGG CGCCAAAATT GTGGGGCACT GGCCCGTTGA AGGTTATGAG
TTTGATGCAT CTAAGGCATT AATAGAGGGT GAGGGCCTGT TTGTTGGCCT TGGTATAGAT
GAAGATCAAC AGCCAGAGCT AAGTGCATCG CGTCTAAATA AGTGGGTGTC GCAAATTAGT
CATGAATTTA ACCTAGGATA CGAGCCAATA GAATTGGATG ATTAG
 
Protein sequence
MAITAFGSIG EAAVAAKIGL IYGSDDGNTE TIAFRIQARL GEENVDVLDV SDVTQMDFAS 
YDKLILGIPT WDFGQIQSDW EDFWDDVKEV GFEGKTVALF GLGDQFGYGD FFLDAMGMLH
DVIVENGAKI VGHWPVEGYE FDASKALIEG EGLFVGLGID EDQQPELSAS RLNKWVSQIS
HEFNLGYEPI ELDD