| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1723 |
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| Symbol | |
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| ID | 3966529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2196685 |
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| End bp | 2197662 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920804 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527195 |
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| Protein GI | 90021368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGAA GTGCAGCGAC ACAACCCCGT ACACGAGGCA AAAAGCCGAC AGCGACCATG
CTGAAAGTTA ACGGCTTTCC CGGCGAAAAC GAGCTGAGAG ATTTACAGTT TAAGCTGGCC
TACAACCTAC AAAGCACTTT AGATGTAGTA AATACATTGG AGTTGTTCTT TAGCAATATT
CAAGATCTAT TCGAAGTAAA TGGATTAAGT TTCGATAATT TAGAAGGTAT TGAATTAAAG
CTTGGGTCTC AAGAGAAACA TTCCGCCTGC TACAACGTTG CAACCAGCAC CATTCAACTG
GGCAAAATTG AATTTAGGCG CGCCAAACCA TTTTTAGAAA CAGAGCTAAC CTTAATGGAA
ATGCTTATAG GTGTGCTCTT TTACCCATTG CGTAACGCGC TGTTATACCG CGCTGCGCTC
GATAGCTCTA TGCGCGACCC CCTTACAGGG ATTGGTAATC GGCAGGCAAT GGACAATTGT
TTTGCACGTG AAATTAAGCT TTCGCTGCGC CATCAAACGC CGCTTAGCCT AATGCTTATC
GATGTGGATT TCTTCAAGAA ACTCAACGAT ACATATGGCC ACCGCGCCGG TGACAAAATG
CTTAAGCATA TTGTCACCAA CATCAAAAAC TCACTGAGAG AAACCGATCA AATATTCCGG
TTTGGTGGAG AAGAGTTTGT GGTGCTACTG CACAATACCG ACGCCGAAAA CGCTCGCCTA
ACCGCAGAGC GCATCCGCAT TCATTCGGCC ATTACACCAA TGGAGATCGA CGGCGAAAAT
GTAGCGTCCA CGATTAGCCT AGGGGTAACC ACTTTAATTG ATACAGATAA CGTGGAATCG
TTTTTTGAGC GCGCTGACTG CGCGTTATAT CAAGCGAAAA AAGAAGGGCG AAATAAGGTG
GTGGTTGAAT CTTCGAACAA CATGCGGCAG CACAACCGCA ACAGCGAAGC TCACGCAGGC
CAATCTAGCA CTGCGTGA
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| Protein sequence | MARSAATQPR TRGKKPTATM LKVNGFPGEN ELRDLQFKLA YNLQSTLDVV NTLELFFSNI
QDLFEVNGLS FDNLEGIELK LGSQEKHSAC YNVATSTIQL GKIEFRRAKP FLETELTLME
MLIGVLFYPL RNALLYRAAL DSSMRDPLTG IGNRQAMDNC FAREIKLSLR HQTPLSLMLI
DVDFFKKLND TYGHRAGDKM LKHIVTNIKN SLRETDQIFR FGGEEFVVLL HNTDAENARL
TAERIRIHSA ITPMEIDGEN VASTISLGVT TLIDTDNVES FFERADCALY QAKKEGRNKV
VVESSNNMRQ HNRNSEAHAG QSSTA
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