Gene Sde_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1717 
Symbol 
ID3966504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2190634 
End bp2191392 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID637920798 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_527189 
Protein GI90021362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT CTAAACCAGC AACTGCCCCA ATAGCCCCCT CAGAGACCAA GGAGCCCAAA 
AAGGAGAATT TGCTTCTTAA TATTGCGCTC AACATCGTCA TTCCTACCAT CATTCTGACG
AAATACAGTG GCGAAAGCCA TCTCGGCCCG CAGGCAGGCA TTGTTATTGC TCTGTCTTTC
CCTATTTTGT ACGGTATTTT TGACTTTTTC CGCGCACGCA AAATTAACGT TTTTTCTGCA
TTAGGGGTGT TCAGCATCGC CCTTACCGGT AGCTTTATGT TGTTAAAGCT AGACACCCAA
TACATAGCAA TAAAAGAAGC TGCAATTCCG GGAATACTTG GTTTGGCTAC ACTGCTTTCC
CTCAAAACCA AGTACCCAAT AGTGCGCACA TTCCTGTACA ACGACAAAAT ACTGCAGGTT
GATAAAGTAG CCAAGGCGCT AGAGCAGAAC AACAAAGTTA AAGAGTTCGA GCAAACATTA
ACCCGCGCAT CGGTAATGAT TGCCTGTTCT TTTTTCTTAT CATCAGTACT TAACTACGGC
TTGGCCAAAT ATTTACTGGT AAGCCCTGCA GGTTCTGAAG AGTCGGTCAT TGAACTTGGC
CGAATGACAG CCCTTAGCTT CCCTGTAATT ACCATTCCCG CAATGACCGT ATTAATGGCC
ACCTTATTTT ATTTGTTTCG CAGCATTAAA AAGCTCACCG GCTTGCGCTG GGAAGACCTT
ATGCACGGAA TGGAAGACGT AGAAACAGAC AAAAAGTAA
 
Protein sequence
MNDSKPATAP IAPSETKEPK KENLLLNIAL NIVIPTIILT KYSGESHLGP QAGIVIALSF 
PILYGIFDFF RARKINVFSA LGVFSIALTG SFMLLKLDTQ YIAIKEAAIP GILGLATLLS
LKTKYPIVRT FLYNDKILQV DKVAKALEQN NKVKEFEQTL TRASVMIACS FFLSSVLNYG
LAKYLLVSPA GSEESVIELG RMTALSFPVI TIPAMTVLMA TLFYLFRSIK KLTGLRWEDL
MHGMEDVETD KK