Gene Sde_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1716 
Symbol 
ID3966503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2190292 
End bp2190591 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content50% 
IMG OID637920797 
ProductYciI-like protein 
Protein accessionYP_527188 
Protein GI90021361 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTG CAATAATCAG CCAAGACGTA CCCAACAGCT TACCCCTAAG AAAAACCGCA 
CGAGCCGACC ATATTGCGCG ATTAACAGAG TTGCGCGATG AAGGCCGCTT GATACTAGCT
GGCCCCCACC CTGCAATTGA GTCAGACGAC CCTGGCGACG CTGGGTTTAC CGGTAGCTTG
GTAGTTGCAG AATTCGCCAG CCTACAAGAC GCACAAAGCT GGGCAGATAG CGACCCTTAC
ATTAAAGCTG GCGTATATGA ACGAGTTACC GTTAAGCCAT TCAAAAAAGT ATTACCCTAG
 
Protein sequence
MLFAIISQDV PNSLPLRKTA RADHIARLTE LRDEGRLILA GPHPAIESDD PGDAGFTGSL 
VVAEFASLQD AQSWADSDPY IKAGVYERVT VKPFKKVLP