Gene Sde_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1712 
Symbol 
ID3966499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2187471 
End bp2187866 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID637920793 
ProductCBS domain-containing protein 
Protein accessionYP_527184 
Protein GI90021357 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCAA TTTTGGTTCG TGACTATATG GATCGCAATC CACACGCTAT TAATCAGCTA 
GCGAGTGTGC GCGAAGCCAT TGGAGTACTC GTCAACGAAG GTATTACTGG GGCACCAGTT
ATTGACGACT CTAAAACACT AGTGGGGTTT ATTTCAGAGC ACGACTGCAT CCGGCAACTA
TTAAACGATG CCTTTTACTA TGATGAATCC GCAGCAATCG GCGCTATTAT GCGTACAGAT
TTAAAGAGCG TAACGCCAGA TACCTCCATA CTCACCATTG CAGAAGCCAT GGCTAACGGC
CCCCCCAAGA ATTACCCTGT TGTTGATAAT GGCAAGCTTG TTGGGCTTAT TTCTAGAGCA
CACGTATTAA GAGCACTGCT CACCGTTAAC GATTAA
 
Protein sequence
MHSILVRDYM DRNPHAINQL ASVREAIGVL VNEGITGAPV IDDSKTLVGF ISEHDCIRQL 
LNDAFYYDES AAIGAIMRTD LKSVTPDTSI LTIAEAMANG PPKNYPVVDN GKLVGLISRA
HVLRALLTVN D