| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1709 |
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| Symbol | |
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| ID | 3966496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2184079 |
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| End bp | 2184999 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920790 |
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| Product | hypothetical protein |
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| Protein accession | YP_527181 |
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| Protein GI | 90021354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.53026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.973713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACA TATCTAGACG TCACATGTTC CAACTCGCCT CAGGGGCAGC AGCTTTAGCG
GCAAGTACCA GCGTCGTTCC TGCACTTGCA GGCCATCACA AACACCCCTT TTTCCAAATT
TCTCTCGCCC AGTGGTCGCT GCATCGCGCA TTTAAAAATG GCGTCGCCAA GCCAGAGAAC
TTTGCATACA TTGCCAAGCA GGTATTCGAC ATACGCGGCA TTGAATATGT TAATCAGTTT
TACTACGACA CCTATAGCGA CACATTAATA AAAAACCTCA AAAACCAAGC CGATAGCGAA
GGTGTTGAGA GCCTACTGAT AATGGTGGAT CGCGAAGGAG ACCTAGGTGC AGGTAATAAA
AAAGAGCGCA AGCTCACCGT CGAAAAACAT CATCGCTGGG CACATATGGC AAAAGCATTA
GGTTGTCACT CTATTCGCGT CAATGCGCGC AGCGTAGGCA GCTACGATGA GCAAATGAAA
AGTGCCGCCG ATGGCCTGCA TCAACTAGGC GACTACTGCG ACAAACTTGA CTTAAATGTA
CTTGTCGAAA ATCACGGCGG CCTCTCTTCA AATGGCCAAT GGCTAGCTGG GGTAATGAAA
CTGGCCGACC ACCCACGCGT TGGCACCCTG CCCGATTTTG GTAATTTTGT AACAAACTGG
GAAACCGGCG AAAGCTACGA TCGCTACAAA GGTGTTGCAG AGCTTATGCC TTGGGCAAAA
GCCGTAAGCG CTAAATCGTT TGAATTCGAT AAAAATGGCA ATGCCGTACA AACCGATTTT
TATCGCATGA TGAAAATAGT AAAAGACGCA GGCTACAAGG GTTGGGTAGG CATTGAGTAC
GAAGGCGACA AAGAGGGCGA AATAGAAGGT ATATTCAAAA CCAAAGCCCT ACTCGAACAC
ATACAAAAAG CAGACTCATA A
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| Protein sequence | MAHISRRHMF QLASGAAALA ASTSVVPALA GHHKHPFFQI SLAQWSLHRA FKNGVAKPEN
FAYIAKQVFD IRGIEYVNQF YYDTYSDTLI KNLKNQADSE GVESLLIMVD REGDLGAGNK
KERKLTVEKH HRWAHMAKAL GCHSIRVNAR SVGSYDEQMK SAADGLHQLG DYCDKLDLNV
LVENHGGLSS NGQWLAGVMK LADHPRVGTL PDFGNFVTNW ETGESYDRYK GVAELMPWAK
AVSAKSFEFD KNGNAVQTDF YRMMKIVKDA GYKGWVGIEY EGDKEGEIEG IFKTKALLEH
IQKADS
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