| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1704 |
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| Symbol | |
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| ID | 3966491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2177107 |
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| End bp | 2178738 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920785 |
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| Product | glycosyl hydrolase family chitinase |
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| Protein accession | YP_527176 |
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| Protein GI | 90021349 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3469] Chitinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.861913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA AAACTTTAGC CGTTGCAGGG CTAGCTTTAG CAGCAAACAA TGCATTCGCA
GCAACCAATT GCAGTGACCT CACCGACTGG AATAGCAGCA CAGCCTATAC CGGTGGCACC
TCGGTAAAAC ACGCCAACAG TAAGTACACC GCCCAGTGGT GGACACAGGG TGCAGACCCG
ACAAGCCATT CAGGCCAATG GCAAGAGTGG AAATTTATAG ATCAGTGCTC TTCATCGTCT
AGCTCAAGTA GCTCTAGCAG CAGTTCCAGC TCGTCCAGCA GTAGTTCAAG CTCTAGCAGC
TCATCTTCAA GCTCTTCCAG TAGCACCTCT TCAAGTTCAT CCAGCTCATC CAGTTCTGGC
GGCAGCTGTA CAGACGCCCC CGTCTTTGCA GAAAACACCG CATATAACAC CGGCGATGTT
GTAACCAACT TAGAAAATTT ATACAGCTGT GTTGTACCCG GTTGGTGTAA ATTGGGTGGC
GCCTATGAGC CAGGTCAAGG CTGGGCGTGG GAGCATGCTT GGAACCACGT AGGTACTTGT
GGTACGTCAT CCTCTTCATC TAGCTCGTCT TCCACCTCCT CTAGCAGCTC AAGCTCGTCT
AGCTCATCCA GTTCATCAAG CTCTAGCAGC TCGTCGTCAT CCGGCGGTGT GGGTGGCGGA
AAGGTGCCTG CACACTCACT TGTAGGCTAC TGGCACAATT TTGTTAACGG CGCAGGCTGC
CCAATGCGCT TAAGTGAAAT GTCGGATAAG TGGGACGTAA TTGACATTGC CTTTGCCGAT
AACGACCCAG CAAGCAATGG TACCGTACAC TTTAATTTGT TCCCCGGTAC AGGCAACTGC
CCAGCAATGA ATGCAGAACA ATTCAAAGCC GATATGCGTG CGCTACAGGC ACAAGGTAAA
GTATTTGTGT TATCGCTTGG TGGCGCAGAA GGCACCATAA CCTTAAACAC CGATGCCGAC
GAAGTTAATT TTGTTAACAG CTTAACTAAC TTAATTAACG AGTGGGGATT CGATGGTGTA
GACATAGATT TAGAAAGCGG CTCGCAACTT TTGCACGGCT CGCAAATTCA AGCGCGCCTC
ATTACGTCGC TGCGCACCAT TGATGCCAAT GTAGGCGGTA TGGTGTTAAC CATGGCACCA
GAGCATCCTT ATGTACAAGG TGGCTACATT GCTTACTCAG GAATTTGGGG TGCGTATTTG
CCAATTATTG ATGCGCTGCG CGATCAGTTG GATCTACTGC ATGTGCAGCT GTATAACAAT
GGCGGCATCC TATCGCCTTA TAACCCGCAA ACGTTCCCTG CAGGCTCAGT AGATATGATG
GTTGCCTCTG CACGTATGCT TATAGAAGGC TTTAATACGG GCGATGGCGG TTACTTCCAA
GGTTTGCGAC CAGATCAGGT ATCACTAGGC TTACCTTCTG GCCCAAGCTC TGCTGGCTCT
GGCTTGGCAA CTAACCAAGC AATCATGGAC GCATTGGATT GTATTACCCG AGGAACACAT
TGCGGCACTA TCGACGCCGG CGGCATATAC CCGTCATTTA ACGGTGTAAT GACGTGGTCG
ATAAACTGGG ATGCCCACGA TGGCTATATT TTCTCTAACC CTATTGGCGA TAAGGTTCAC
AGCTTACCGT AA
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| Protein sequence | MFKKTLAVAG LALAANNAFA ATNCSDLTDW NSSTAYTGGT SVKHANSKYT AQWWTQGADP
TSHSGQWQEW KFIDQCSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSTS SSSSSSSSSG
GSCTDAPVFA ENTAYNTGDV VTNLENLYSC VVPGWCKLGG AYEPGQGWAW EHAWNHVGTC
GTSSSSSSSS STSSSSSSSS SSSSSSSSSS SSSSGGVGGG KVPAHSLVGY WHNFVNGAGC
PMRLSEMSDK WDVIDIAFAD NDPASNGTVH FNLFPGTGNC PAMNAEQFKA DMRALQAQGK
VFVLSLGGAE GTITLNTDAD EVNFVNSLTN LINEWGFDGV DIDLESGSQL LHGSQIQARL
ITSLRTIDAN VGGMVLTMAP EHPYVQGGYI AYSGIWGAYL PIIDALRDQL DLLHVQLYNN
GGILSPYNPQ TFPAGSVDMM VASARMLIEG FNTGDGGYFQ GLRPDQVSLG LPSGPSSAGS
GLATNQAIMD ALDCITRGTH CGTIDAGGIY PSFNGVMTWS INWDAHDGYI FSNPIGDKVH
SLP
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