Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1703 |
Symbol | |
ID | 3966490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2175816 |
End bp | 2176994 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920784 |
Product | hypothetical protein |
Protein accession | YP_527175 |
Protein GI | 90021348 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.595343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TTATCCTTAT GGTGGCGCTG TTGGCTTTTA GTGTTAGTTC TTTTGCTGCA CTGTCTTCAG GCCGCTACAT TATTGTTTCT AAACTTAATG GCAACGCGTT AGATGTAGAT AGCTTTAGCA CCGCAGATGG CGCCAATGTT ATGCAGTGGT TTGCTTTGGG TGGTGTGAAC CAGCAGTTTG ACGTGGCAGT GCTTAGCGAT GGCAGTTACT CCATACGACC AGTGCACAGC GGTAAGTCAT TAGATGTATA TGCGTGGAAC GCAGACGATG GTGCGGAACT TCGTCAGTGG GCATACACAG GCGCAGATAA CCAACGTTGG TATATCGATA ATCAAAGTGG CGATTACTAT TCAATTACGT CTAAATTTAG CGGGCGCGCA TTGGATGTAT GGGGTATGAG TATGTACACC GGCGCAGATG TCCGCCTTTA TTCATATTGG GGCGGCGCGG GGCAGCTGTG GACCTTCCAA AAGGTAGGTA GCTCAAGTGA GTGTTACGCA GGTGCTACGT TAACAAACCG CTTTGTGGAT TGTGGCGGCA AAACAATAGG CCTTAGTTGT GTAGGCGATA GTGAAACTCA AGGCGCGGTG CTAACCCTTA AAAACTCGTC CATTCGCAAT GTTAAGTTGG CTGCAAACGG TGGTGCGGAT GGCATTCACT GCACTAGTGG CAACTGCACA TTAGCCGACG TTGTTTGGAA CGATATTTGT GAAGATGCTG CCACGAATAA GTCTGAAGGT GGCACCCTGA CTATTGTGGG TGGTTCGGCG TATAACTCTA CTGGCGGGTA TGGTGGTACA CCGGATAAAA TTTTTCAGCA CAACTCGAAA AACAGCACAA CAATTGTTGC CGGCGGCTTC ACTGCATATG GTACCCACGG TAAGTTGTGG CGCTCGTGTG GTAACTGTAC AAACAACGGC GGTCCGCGTA ATTTACTGGT TTATAGCGTG AATATTGACG CAAGTATTGG CGCAATTGCT GGTGTTAACC GCAATTACGG CGATAGAGCG ACCATTCGCG ACCTAAAAAT AAAGAATTAT TCTTCTGGCA GCCCGCATGT GTGTGACGAA TATCAAGGCG TACAGAAGGG CAATTCTTCT ACAAAATATG GCGAGTACTG GAATACCGCA AGTTGTGATG TTTCGCGGTC AGATGTAAGT GGGCTTTAA
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Protein sequence | MKKLILMVAL LAFSVSSFAA LSSGRYIIVS KLNGNALDVD SFSTADGANV MQWFALGGVN QQFDVAVLSD GSYSIRPVHS GKSLDVYAWN ADDGAELRQW AYTGADNQRW YIDNQSGDYY SITSKFSGRA LDVWGMSMYT GADVRLYSYW GGAGQLWTFQ KVGSSSECYA GATLTNRFVD CGGKTIGLSC VGDSETQGAV LTLKNSSIRN VKLAANGGAD GIHCTSGNCT LADVVWNDIC EDAATNKSEG GTLTIVGGSA YNSTGGYGGT PDKIFQHNSK NSTTIVAGGF TAYGTHGKLW RSCGNCTNNG GPRNLLVYSV NIDASIGAIA GVNRNYGDRA TIRDLKIKNY SSGSPHVCDE YQGVQKGNSS TKYGEYWNTA SCDVSRSDVS GL
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