Gene Sde_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1697 
Symbol 
ID3966484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2168232 
End bp2169512 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID637920778 
Productseryl-tRNA synthetase 
Protein accessionYP_527169 
Protein GI90021342 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0685581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACC CGAAATTACT TCGCAATCAA TTAAACGATG TAGCCGAAAA TTTAAAAAAG 
CGTGGCTATG AATTAGATAC CCAAGCGTTT ACAGCGTTAG AAGAGCGCCG TCGCACATTG
CAAACTGCGT GCGAATCGTT GCAGCAAGAG CGTAATACCC GCTCTAAAAA TATTGGTAAA
GCAAAAGCCG CGGGTGAAGA TATTGGCCCA TTGCTGCAAG AAGTTGATAA CTTGAAATCG
GCATTGGCTG AAGCCGAGCA AAACCTGCAA GCATTGCAAG GTGAGTTGGA AGCGTTGGTT
TCTGCTATTC CAAATATGGT GCACGATGAT GTGCCTGCCG GTAAAAGTGA AGACGACAAC
GTAGAGATTA GTAAGTGGGG CGAGCCAAAA ACCTTCGACT TTGAAGTGCA AGACCACGTA
GATGTGGGTG CAGCCATTGG CGGTTTAGAT TTTGAAACGG CTACTAAAAT TACTGGCGCG
CGTTTTTCGT TAATGCGTGG CGATATTGCA AGCATGCACC GTGCGCTTAC TCAGTTAATG
CTCAATACAC ACATTGATGA GCACAAATAC GAAGAAGTAT ATGTGCCTTA TATTGTGAAT
AAAGATTCAC TCTATGGTAC CGGCCAATTG CCAAAGTTTG AAGAAGATCT GTTCAAACTT
ACCGACGATC GCGAGTTCTA TTTAATTCCC ACCGCAGAAG TACCTGTTAC CAATATTGCG
CGCGGTGAAA TTTTTGATGA GAGCCAATTA CCTGTGCGAT TTGTTGCGCA CACACCATGT
TTTCGTTCTG AAGCAGGTAG CTACGGTCGC GATACGCGCG GCATGATTCG TCAGCACCAG
TTTGAAAAAG TAGAGCTTGT GCAGTTGGTT AAGCCAGAAG ACTCGCTCAA CGCGTTAGAA
GAGCTCACAC AGCACGCCGA AGCTATATTG CAAAAACTGG GCTTACCTTA TCGTAAAGTA
GTGCTGTGCG GCGGCGACAT AGGCTTTAGT GCGACGAAAA CCTACGACCT AGAAGTGTGG
ATTCCTTCGC AGGGTAAGTA CCGCGAAATT TCTTCGTGCA GTTGTTTTGG TGATTTCCAA
GCGCGCAGAA TGATGGCCAG ATACCGCAAT AGCGAAACCA ATAAGCCAGA ATTACTGCAC
ACCATTAACG GTTCTGGTTT GGCTGTGGGC CGTACATTGG TAGCTGTTTT AGAAAACTAT
CAGCGCGAAG ATGGCAGTGT AGAAATCCCT GCTGCTTTGC AACCGTATAT GAATGGTAAA
ACGGTTATTG CTAAGGCTTA G
 
Protein sequence
MLDPKLLRNQ LNDVAENLKK RGYELDTQAF TALEERRRTL QTACESLQQE RNTRSKNIGK 
AKAAGEDIGP LLQEVDNLKS ALAEAEQNLQ ALQGELEALV SAIPNMVHDD VPAGKSEDDN
VEISKWGEPK TFDFEVQDHV DVGAAIGGLD FETATKITGA RFSLMRGDIA SMHRALTQLM
LNTHIDEHKY EEVYVPYIVN KDSLYGTGQL PKFEEDLFKL TDDREFYLIP TAEVPVTNIA
RGEIFDESQL PVRFVAHTPC FRSEAGSYGR DTRGMIRQHQ FEKVELVQLV KPEDSLNALE
ELTQHAEAIL QKLGLPYRKV VLCGGDIGFS ATKTYDLEVW IPSQGKYREI SSCSCFGDFQ
ARRMMARYRN SETNKPELLH TINGSGLAVG RTLVAVLENY QREDGSVEIP AALQPYMNGK
TVIAKA