Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1686 |
Symbol | clpS |
ID | 3966473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2154629 |
End bp | 2155003 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920767 |
Product | ATP-dependent Clp protease adaptor protein ClpS |
Protein accession | YP_527158 |
Protein GI | 90021331 |
COG category | [S] Function unknown |
COG ID | [COG2127] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000015974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAC TTGAAAAACT TCTACTAACA TTAAGTAAAG AGAGTGATGA AGACACCACT TTTGACGGTG GAGTCGCCGT ACAGGCGGAA AAGCCTCGCT TAAAGCGGCC CCCAATGTAC AAAGTAGTTA TGTTGAATGA TGACTACACG CCAATGGAAT TTGTGGTTGA GGTGTTGGAA CTCTTTTTTA GTATGAATCG TGAATCGGCA ACAAGAATTA TGCTTCGCGT TCATACAGAG GGAAAGGCTG TTTGCGGTGT GTTTTCGCGT GATGTAGCAG AAACAAAAGC GGCCCAAGTA AACCAATACG CAAAACAAAA TGAACATCCG TTGCTTTGCG AGATCGAAGC GTCATCCGAT GACGATTCGG ACTAG
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Protein sequence | MGKLEKLLLT LSKESDEDTT FDGGVAVQAE KPRLKRPPMY KVVMLNDDYT PMEFVVEVLE LFFSMNRESA TRIMLRVHTE GKAVCGVFSR DVAETKAAQV NQYAKQNEHP LLCEIEASSD DDSD
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