Gene Sde_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1686 
SymbolclpS 
ID3966473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2154629 
End bp2155003 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content44% 
IMG OID637920767 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_527158 
Protein GI90021331 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000015974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAC TTGAAAAACT TCTACTAACA TTAAGTAAAG AGAGTGATGA AGACACCACT 
TTTGACGGTG GAGTCGCCGT ACAGGCGGAA AAGCCTCGCT TAAAGCGGCC CCCAATGTAC
AAAGTAGTTA TGTTGAATGA TGACTACACG CCAATGGAAT TTGTGGTTGA GGTGTTGGAA
CTCTTTTTTA GTATGAATCG TGAATCGGCA ACAAGAATTA TGCTTCGCGT TCATACAGAG
GGAAAGGCTG TTTGCGGTGT GTTTTCGCGT GATGTAGCAG AAACAAAAGC GGCCCAAGTA
AACCAATACG CAAAACAAAA TGAACATCCG TTGCTTTGCG AGATCGAAGC GTCATCCGAT
GACGATTCGG ACTAG
 
Protein sequence
MGKLEKLLLT LSKESDEDTT FDGGVAVQAE KPRLKRPPMY KVVMLNDDYT PMEFVVEVLE 
LFFSMNRESA TRIMLRVHTE GKAVCGVFSR DVAETKAAQV NQYAKQNEHP LLCEIEASSD
DDSD