Gene Sde_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1678 
Symbol 
ID3965155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2146298 
End bp2146714 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID637920759 
Producthypothetical protein 
Protein accessionYP_527150 
Protein GI90021323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG ATATTCGTGT TATTACTACT ACTTTAGTCG TAAAAATAGT GCATGTTTGT 
TTGGCTGCTC TACTAGTGTA CTGCGCAGTA ATCCAGCTTA ACGACCCCGA CCCTTATTTT
TGGGCGCTTA TGTACGCCGT TTGTGCGGCT GTGCCTTTAA TGAATTTATT TGCACGTAAT
TATTTGGCGG TTTGCTGGCT GGCAATGTTG TTGTGTTCGG TTGGTATTGG GGTTTCCAGT
GGTGGCATGA TCGAATACTT GCAAAATGCG GGCGAAGAGC CACTTATGCA GCCAATGAGC
GATGAAAAAT ATTACATAGA AGAAGCGCGC GAAATGCTTG GTGCGTTAGT ATCATTACTC
ATAGTGTTGG GATATTTTGT TATTAAGCGC TCGCGTAGAA CTGCTACACA AAACTAA
 
Protein sequence
MSRDIRVITT TLVVKIVHVC LAALLVYCAV IQLNDPDPYF WALMYAVCAA VPLMNLFARN 
YLAVCWLAML LCSVGIGVSS GGMIEYLQNA GEEPLMQPMS DEKYYIEEAR EMLGALVSLL
IVLGYFVIKR SRRTATQN