| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1677 |
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| Symbol | |
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| ID | 3965154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2145011 |
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| End bp | 2146153 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637920758 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_527149 |
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| Protein GI | 90021322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAG AAATAGCCCC TTTTACGCCC AACGACCCGC GACCAGCCAA TGAGATTACC
GTCATTGTTG GCATGTCTGG CGGCGTGGAC TCCTCCGTTT CGGCGCTTTT GCTTAAGCAG
CAGGGCTACA AGGTGGAAGG TTTGTTTATG AAAAACTGGG ACGAGGACGA CGGCACAGAA
TACTGCACCG CCATGACCGA CCTGATGGAT GCCGCAGCCG TATGCCAAAA ACTCGATATT
CACCTGCATA CAGCCAATTT CGCCCGCCAG TACTGGGATA ACGTATTCGA ATACTTCCTA
GAGGAGTACA AGGCCTGCCG CACGCCCAAC CCTGATATTC TATGTAATAG AGAAATTAAA
TTTAAAGTAT TCCTAGAGTA CGCCAAGAAA TTGGGTGCAG ATTACATCGC CACGGGCCAC
TACACCCGCA CCAGCCAACA CGAAGGCTGC ACTCAACTGC GCAAAGGTTT AGACCCCAAT
AAAGACCAAA GCTACTTTCT ACACGCGGTA GGCGAACAGG AATTTGCACA AACCCTCTTC
CCTATTGGTG ACATTGAAAA GCCACAAGTG CGCGCAATTG CAGAAGAGCG CGGGCTTGTC
ACCCATAACA AAAAAGACAG CACCGGCATA TGCTTTATTG GCGAGCGTCG CTTTAAAGAC
TTTCTAGAAA CCTACCTGCC CGCGCAGCCC GGCGTTATCG TCGATGAAAA CGGTGTTGAA
ATTGGTAAAC ACCAAGGCTT GATGTATCAC ACCATTGGCC AGCGCCAAGG CTTGGGCATT
GGCGGCGTAC CAGGTCGCCC GGAAGCGCCT TGGTATGTGG CAGAAAAGCG CTTGCAAACC
AATCAGCTAG TAGTGGTTCA AGGTAGCAAC CATCCTTTGC TGTTCAGCAA CGAACTTACA
ACAGGCGCTA TGCATTGGAT AAACCCACGC TTGGCACCAA CACTTAGCGA ACCATTTCGC
TGCACTGCAA AAACACGCTA CCGACAACCG GAACAGTGGT GTACGCTAAC GGCTAACGGC
GACGGTGTTA TCGCAGTATT CGATGAGCCT CAGCGCGCCG TAACCCCTGG GCAGTCCGCT
GTATTTTACC AAGGCGACAT CTGCCTTGGT GGGGCCGTAA TAGAAACAAC GCGCAAACAT
TAG
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| Protein sequence | MAIEIAPFTP NDPRPANEIT VIVGMSGGVD SSVSALLLKQ QGYKVEGLFM KNWDEDDGTE
YCTAMTDLMD AAAVCQKLDI HLHTANFARQ YWDNVFEYFL EEYKACRTPN PDILCNREIK
FKVFLEYAKK LGADYIATGH YTRTSQHEGC TQLRKGLDPN KDQSYFLHAV GEQEFAQTLF
PIGDIEKPQV RAIAEERGLV THNKKDSTGI CFIGERRFKD FLETYLPAQP GVIVDENGVE
IGKHQGLMYH TIGQRQGLGI GGVPGRPEAP WYVAEKRLQT NQLVVVQGSN HPLLFSNELT
TGAMHWINPR LAPTLSEPFR CTAKTRYRQP EQWCTLTANG DGVIAVFDEP QRAVTPGQSA
VFYQGDICLG GAVIETTRKH
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