Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1675 |
Symbol | |
ID | 3965152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2142810 |
End bp | 2144189 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920756 |
Product | adenylosuccinate lyase |
Protein accession | YP_527147 |
Protein GI | 90021320 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAT CTTCACTTAC CGCAGTTACC CCAATAGACG GCCGATACGG CAGTAAAACC GATGCTTTGC GTCCTATTTT TAGCGAATTT GGCCTTATCC GTTGCCGCGT TGAAGTGGAA ATTCGCTGGC TACAACAATT GGCGGCACAC CCAGCAATTA CCGAAGTGCC AGCGCTTAGC GAAGAAGCAA ACAACCTGCT TAACGGTATT GTAGATAACT TCAGTGAAGA AGACGCTCTA GCAGTTAAAA ACATCGAACG CACCACCAAC CACGACGTAA AAGCCGTGGA ATACTTTATT AAAGACAAAT TCGGTAGCAA CCAAGAGCTG CAAGCAATTA ACGAGTTTGT GCACTTTGCC TGTACATCAG AAGACATTAA CAACCTGTCA CACGGTTTAA TGCTTAAAGC CGGCCGCGAC GCCGCCCTAC CCGTGTTGCA AGAAATTACA GACGCTATTG CCAATATGGC GCAAGCCTAT GCTGCAGTGC CTATGCTTTC ACGCACCCAC GGGCAAACGG CATCGCCGAG TACTGTTGGT AAAGAAATGG CTAACGTGGC AGCTCGCTTG GCGCGTCAAA TTAAGCAAAT TAAAGCAGTA GAATTACTAG GCAAAATTAA CGGTGCAGTA GGCAACTACA ACGCCCACCT ATCTGCCTAC CCAGATGTAG ATTGGGAAGC TAACGCAAAA ACATTTGTAG AAAGCCTTGG CTTAAGCTGG AACCCTTACA CCACGCAAAT TGAACCACAC GACTATATTG CCGAATTGTT TGACGCATTT GCTCGTTTCA ACACCATACT CATCGACTTT AACCGCGATG TGTGGGGCTA TATTTCTCTG GGCTTTTTCA AACAAAAAAC CATCGCTGGC GAAGTGGGTT CATCTACCAT GCCACACAAA GTTAACCCTA TCGACTTTGA AAACTCGGAA GGTAACTTGG GCATTGCCAA CGCAATATTT AATCACCTAG CAGCTAAGCT ACCTATTTCT CGCTGGCAGC GCGACTTAAC GGACTCAACC GTATTGCGCA ATATGGGTGT GGGTTTTGGT TATAGCTTTA TTGCTTACGC CTCTAACCTA AAAGGGATTG GTAAGTTAGA AATTAACGAA ACCGCATTGG CAAACGACTT AAACAACGCG TGGGAAGTAT TGGCAGAGCC AATCCAAACC GTTATGCGTC GCTACGGCAT CGAAAAGCCC TACGAGAAGT TAAAAGAACT TACCCGCGGC CAAAGCATTA ACCAAGAAGT TATCCAAGGT TTTGTGCAAA CGTTAGAAAT ACCAGAACAA GCCAAACAAG AACTTATGGC TTTAACACCC GCTACCTATA TTGGTAACGC GGTGGCGCAA GCAAATGCCA TTAAAGATCG CATGGCCTAG
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Protein sequence | MDLSSLTAVT PIDGRYGSKT DALRPIFSEF GLIRCRVEVE IRWLQQLAAH PAITEVPALS EEANNLLNGI VDNFSEEDAL AVKNIERTTN HDVKAVEYFI KDKFGSNQEL QAINEFVHFA CTSEDINNLS HGLMLKAGRD AALPVLQEIT DAIANMAQAY AAVPMLSRTH GQTASPSTVG KEMANVAARL ARQIKQIKAV ELLGKINGAV GNYNAHLSAY PDVDWEANAK TFVESLGLSW NPYTTQIEPH DYIAELFDAF ARFNTILIDF NRDVWGYISL GFFKQKTIAG EVGSSTMPHK VNPIDFENSE GNLGIANAIF NHLAAKLPIS RWQRDLTDST VLRNMGVGFG YSFIAYASNL KGIGKLEINE TALANDLNNA WEVLAEPIQT VMRRYGIEKP YEKLKELTRG QSINQEVIQG FVQTLEIPEQ AKQELMALTP ATYIGNAVAQ ANAIKDRMA
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